Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1064 ATGTTGAAGACGAAAGCATTCATCGGCTCCAACGTCTTCATGTCACGAAACTTAGTTCCTCCTGAAATCTTCGCCACGCTCCACGACGCGCTCAACGATAACGGCGCTCAAATCCATCTCTGTTGTGATCCTTCTCGCAATGGCACCAACGATTATCACATCATTTCCTCCAATAAACACGACAAATTTGAAGATCTTAAAGCCAAGGGATGCAAATTGCTTGGTCCTAGATGTGTTCTGTCGTGTGCTAAAGAATGCAGACCTCTACCTAAACAAGGCTTCACTTGTTGCCTGGCCATGGATGGTGTCAAGCTACTTGCATCTGGCTTTGATATGGATGAGAAGGTTAAGATAGAAGAGTTAGTGACTGAAATGGGTGGAGTTCTACATGCTAAGGCATCACTGGATTTGAACTTTGTCATTGTGAAAAATGTTTTAGCTGCAAAATATAAGTGGGCTTTGAATACCCTGAAGAAACCGATAGTCACTTATGAGTGGTTAAAGCAATGCTCAGATGAGCATCGCGTTGTTCCTCAAGAGTCATACAAGGTCCTTCCTTTCTCCGGGTTAACGATTTGTGTTACTGGAATTCCAGCAGATAAGCGCAGAGAGATGGAGAAACTTATTTTACAAAATGGTGGAAAATACTCTGCAGAACTGACAAAGAAGTGCACACATTTGATTTCTGATGCTCCTGAAGGTGACAAATATAAAGTGGCAAAACGTTGGGGCCACATTCATATCGTGACAAGTAAATGGTTTGATCAATCTATTGTTCGAAGAGCATGTCTGAATGAGGAGTCCTACCCTGTACAGAATGGATCTTTATCTTCACATAAAGTAACTAGGGACTCAACAGTGCAACATAGCCAAGAAAAGGAAATTAGTAAATTGCAATCTGTGGCATCTGCAGCAGCTGCAGATTCAAATGTGACAGTTATTTCTCGTACCGACTGTGTGGATAGAGATCTAGAAGTTACACAGTCAGAATGCATGTCTCCGCTTTCAAATTTTCCTGTATTTGTTAAAGAGGCAGATGCTGAAGTACCACCGGTGAAGTCCAGCAATGAATTGGACTTTGATGGTGTTGTTGCCAATGATTCTGAATCTGATGATAATGATCTGTACTTATCAGAGTGCAGAATATTACTTGTTGGCTTTGAAACATCTGAAATGCGGAAACTAGTTAATATGGTGCGTAAAGGTGGGGGCTCCCGATCTATGTCTTTTAATGACAAGTTGACACATATAGTAATTGGCTGCCCTTCAGAAATGGAAAAGAAGGATATAAGGCGTCTCGCTTCTTTAGGTGTCATTTATGTTGTTACGACATCTTGGCTTGAAGACTGTCACCGTCAAAAGAAAGAAGTCCCTGTTCTTAGGAGACACATTGCGTGTGATCTATTTCTTCCTAAAGCAGCCTCAGTAAAAGGAGCAGCAGTGAAAAGCACCATGTCTACTGATCAAGGTAAAAGCTCTGGCTTTCATCAAAGCTTGCAGACTGACCACATGGTGGATATTATGGATTCCGGAGCTGTAATGCCAGTATCTTTGGAGAAAAGCAAAGAGAAGCCAGATATGGGTATAAATGTTCTGACAGCCAGTAAAGCATTGGGAAGATCCGTGTCAAAAAAGGAACTTCCTGTCGATAAATTTAAGGTTCCAAAGAGGATGAAACAAGACTCCAGTGTTAAAAAAGTGAAGTCAACAACTGTTTTCAGAGGGAAAATATTTTGCTTCTCAAATTTATTTCCTGAAGAAAGGAGAGCTGAGATTGTCCAATGGATAAGTGAAGGGAGTGGACAGGTAATAAGCGAGCAGGCAAATCAGAATGTTCACTATACTATTGAGTGTCATGGTGTAACACCAAAGTTCATTGGCAACTCGCAAAGTATATATATTTCCAGTCATTGGATACGATCTTGCTTGGAGGCTGGATCCTTGCTGGATGTTGAGGGTCACATTCTTTATTCCCCACTTCCTTGCCGTGTTCCATTACCTGGGTTTGAAAGCTTCCGATTTTGTGTTTCACAATATGATGAGAAAGACAGAATCCTACTTAGAAATTTGTGTTTCGTTCTGGGAGCTAAATTTGTGGAGAAGTTGACTAAGAAGGTCACCCATTTGTTGTGTAGATTCACCAATGGTCCTAAGTATGAGGCTGCTTGTAAGTGGGGGGTCCGATCAGTTACATCCGAATGGATATTGGAATGTGTCAAAAAGAATGCAGTTGTTTCAGTTGATCAATTTTTACCAAAAGAAGTCACTGATCAAGACCAAGAGGCAGGAGCTTGCATTACGAGTCAATTTCCTACTCAGGCTGCTCGAATGATAAGTGACATGCCATCCCAGTTTCCAAGTCAATCACAAGATTTGAGAAACATCCCAAATATATACTTTAGTAGTGAAGTAGACAATCATCGCACTGATTCTAAAATATCAAGTATTTACAGCAAAAAAGCAAGGCTTGTGGAAGAGCATGACCTATATGATAAAGTGCCTTTTGCAGTGGATTCAAGTATTCATGTCAATAATATGAATTTCTTTGAAGACAATGTACATAAATATGTTGGGGAGGTTTCACATGCTGTTCCTGATGTCGCTGATGCAATTGAGGACTTGTTAGAGCAGACAAGTAAGATCCATGATCAGGGTTCCCCAGTGCAGGCAGGGTGTGAGAGAAGTATTTACTTGTCCGATTGTTCAGCCCTTGGTGAAGACAATTCAAATCTTCATACTGTCGTTGGGTTATCTAAAAACTGGTTAAACAGTGCCAGACAGGATGATAATGGCGAGGCTTCTCGAGATCGAAGAACCGGAATGTATGATGGTTTTAGTGAAACACAAACAGAATCTCAGGTTGTCAGTTACGAAGAAGATTTATCGGGAAGGCAAATGCTTATAGACAGAGTCCGAACTCGAAGTAGCTTGCAATGA 2937 0.4106 MLKTKAFIGSNVFMSRNLVPPEIFATLHDALNDNGAQIHLCCDPSRNGTNDYHIISSNKHDKFEDLKAKGCKLLGPRCVLSCAKECRPLPKQGFTCCLAMDGVKLLASGFDMDEKVKIEELVTEMGGVLHAKASLDLNFVIVKNVLAAKYKWALNTLKKPIVTYEWLKQCSDEHRVVPQESYKVLPFSGLTICVTGIPADKRREMEKLILQNGGKYSAELTKKCTHLISDAPEGDKYKVAKRWGHIHIVTSKWFDQSIVRRACLNEESYPVQNGSLSSHKVTRDSTVQHSQEKEISKLQSVASAAAADSNVTVISRTDCVDRDLEVTQSECMSPLSNFPVFVKEADAEVPPVKSSNELDFDGVVANDSESDDNDLYLSECRILLVGFETSEMRKLVNMVRKGGGSRSMSFNDKLTHIVIGCPSEMEKKDIRRLASLGVIYVVTTSWLEDCHRQKKEVPVLRRHIACDLFLPKAASVKGAAVKSTMSTDQGKSSGFHQSLQTDHMVDIMDSGAVMPVSLEKSKEKPDMGINVLTASKALGRSVSKKELPVDKFKVPKRMKQDSSVKKVKSTTVFRGKIFCFSNLFPEERRAEIVQWISEGSGQVISEQANQNVHYTIECHGVTPKFIGNSQSIYISSHWIRSCLEAGSLLDVEGHILYSPLPCRVPLPGFESFRFCVSQYDEKDRILLRNLCFVLGAKFVEKLTKKVTHLLCRFTNGPKYEAACKWGVRSVTSEWILECVKKNAVVSVDQFLPKEVTDQDQEAGACITSQFPTQAARMISDMPSQFPSQSQDLRNIPNIYFSSEVDNHRTDSKISSIYSKKARLVEEHDLYDKVPFAVDSSIHVNNMNFFEDNVHKYVGEVSHAVPDVADAIEDLLEQTSKIHDQGSPVQAGCERSIYLSDCSALGEDNSNLHTVVGLSKNWLNSARQDDNGEASRDRRTGMYDGFSETQTESQVVSYEEDLSGRQMLIDRVRTRSSLQ* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1064 978 CDD BRCT_TopBP1_rpt2_like 186 258 - -
Lan9g1064 978 Gene3D BRCT domain 565 662 IPR036420 -
Lan9g1064 978 Pfam twin BRCT domain 673 734 IPR001357 -
Lan9g1064 978 Pfam twin BRCT domain 190 253 IPR001357 -
Lan9g1064 978 ProSiteProfiles BRCT domain profile. 568 656 IPR001357 -
Lan9g1064 978 CDD BRCT 103 170 - -
Lan9g1064 978 SUPERFAMILY BRCT domain 59 183 IPR036420 -
Lan9g1064 978 SUPERFAMILY BRCT domain 571 658 IPR036420 -
Lan9g1064 978 SUPERFAMILY BRCT domain 373 458 IPR036420 -
Lan9g1064 978 SUPERFAMILY BRCT domain 186 272 IPR036420 -
Lan9g1064 978 SMART BRCT_7 184 261 IPR001357 -
Lan9g1064 978 SMART BRCT_7 374 454 IPR001357 -
Lan9g1064 978 SMART BRCT_7 666 742 IPR001357 -
Lan9g1064 978 SMART BRCT_7 570 646 IPR001357 -
Lan9g1064 978 SMART BRCT_7 97 174 IPR001357 -
Lan9g1064 978 Gene3D BRCT domain 186 272 IPR036420 -
Lan9g1064 978 ProSiteProfiles BRCT domain profile. 372 464 IPR001357 -
Lan9g1064 978 MobiDBLite consensus disorder prediction 943 958 - -
Lan9g1064 978 Gene3D BRCT domain 363 461 IPR036420 -
Lan9g1064 978 MobiDBLite consensus disorder prediction 925 958 - -
Lan9g1064 978 ProSiteProfiles BRCT domain profile. 669 752 IPR001357 -
Lan9g1064 978 ProSiteProfiles BRCT domain profile. 100 184 IPR001357 -
Lan9g1064 978 Gene3D BRCT domain 98 185 IPR036420 -
Lan9g1064 978 Gene3D BRCT domain 664 758 IPR036420 -
Lan9g1064 978 Gene3D BRCT domain 38 94 IPR036420 -
Lan9g1064 978 ProSiteProfiles BRCT domain profile. 182 271 IPR001357 -
Lan9g1064 978 SUPERFAMILY BRCT domain 665 753 IPR036420 -
Lan9g1064 978 Pfam BRCA1 C Terminus (BRCT) domain 102 170 IPR001357 -
Lan9g1064 978 CDD BRCT_TopBP1_rpt2_like 667 742 - -
Lan9g1064 978 Pfam BRCT domain, a BRCA1 C-terminus domain 570 652 IPR001357 -
Lan9g1064 978 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 9 966 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1064 1 977 Core DNA Replication Machinery Family AT1G77320 49.513 0.0 908
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1064 K10728 - gmx:100804966 1349.73