Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1063 ATGGTGCAATCAAGCATAGAAAACGGTGGCTCCGGTGGCCGGACGGTGGTGGTGGGGGTGAGGATTGACTCACCCAGTAGAGAGTTGCTCACTTGGGCTATGTTTAAAATTGCTCAGCCTGGTGATGTTGTTCTTGCTCTTCATGTTCTTGGCAACAATGAAATTGTGAATAAAGATGGAAAATCATCTCTTTTTTCACTTGTCAAGGCCTTTGAATCTGTTCTTGCTGTTTATGAAGGATTCTGCAATTTGAAACAGGTGGAACTGAAGATGAAAATTTGCCGGGGTTCATCAGTGAGGAAAATTTTGGTTAGAGAAGCAATTGCATGTTCTGCAACTCATGTTATAGTTGGAACTCCTCATGGACTTCATAAAATTCGGCCCGGTACCACCGTAGCGAAGTACTGTGCTAAAAAGTTATCCAAGGAATGTTGGGTTCTTGGCATTAATAATGGCAAAATTGTGTTCAAGAGAGATGGATCACCAGCAACTCATGCTCACTTAAAAGGAATTGAATTGGATCACAAAAATGGCTTGCTTGATTCGATTCACCGGAGACTCAGCAAGAGTGCAAAAGTACTGAATGATGAAGGCAATGGCCAAATTTTTTCAGATCACAGTTTAGCTAAGATTTTTCTGGATTCTACAGAAAACAAGAGCTGCTCAATTTGTGGTCCAACTTCAGCACCAGACTCATCTTGCCTGGAAAATGCAGAAGACTCTTCTACTGATGGTGATAATCAGAATTCTTTAGCTATAGTGCCTGTACAGACCAATGATTCAGTGTCTCGGGCTAGAACTTTGCATTGCAGAGAACTACCTGAATTGAAACCAGGTTGGCCACTACTACACAGGACGATTTTAAACCGCCGGCATTCTACTGAAAGATCATTGTTACACCAGATCTCTGTAGTCCAGTGGGCAATGCAGCTGCCATGTAGAAATCTTTCATATTCTACCGACCAAGATCTCAAAACAAACAATTATGATGGATCTCAAGATCAATCTTTGGCTCTAGACAGCAAAACTGGTGCTCTTGTTCCAGTAGATACCAAAATTGGGACAGCTTTTTCGCCGGAACGAAATTCAAGAAGTATTCCTAAAGAATTGGAGGGCCTCCATGACAGATACGCATCATCTTGCAGATTGTTCGAGTACCAAGAACTTGTATCAGCAACATCAAATTTTTTGCCGGAAAATTTGATTGGGAAAGGAGGAAGTAGTCAGGTTTATAGAGGCTGCCTTCCTGATGGCAAGGAACTCGCCGTTAAGATCTTGAAGCCTTCTGAAGATGTTTTGGAGGAGTTTGTTCTGGAAATAGAAATCATCACTACCTTGCATCACAAAAATATTATTTCCCTCATTGGGTTCTGCTTTGAGGATGCCAATCTTCTTTTGGTCTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGAACCTTCATGGCAATAAGAAAAACCCACTTGTGTTTGGTTGGAATGAGCGATATAAAGTGGCAATGGGTGTTGCTGAGGCCTTGGAATATCTGCATAATAATGATGGCCAGCCAGTGATCCATCGTGATGTAAAATCATCAAATGTGTTATTATCCGAGGATTTTGAACCTCAGCTGTCCGATTTTGGACTTGCTAGATGGGCATCAACTTCATCATCACATATAACCTGCACAGATGTTGCTGGAACCTTTGGTTACTTAGCTCCTGAATACTTTATGTATGGTAAAGTAAATGATAAGATTGATGTCTATGCATTCGGCGTCGTCCTCCTTGAGCTTCTTTCAGGAAGAAAGCCTATAAGTGGTGATTTTCCCAAAGGTCAAGAAAGCCTTGTAATGTGGGCAAGTCCAATTCTAAATAGTGGGAAGGTATCACAATTGTTGGATCCTGGTTTAGGTGATAATTATGATCATGAAGAGATGGAAAGGATGGTCTTAGCAGCCACACTTTCTATCCGACGCGCTCCAAGAGCTAGGCCACAAATCAACATTATCTCGAAACTCCTACAAGGTGATGCTGATGTAATCAAGTGGGCAAGACTAGAAGTTAGTGCTTTAGTAGCACCTGAAATGCTTGACGATGAAACTTGTCCTGCATCTAACCTACAATCACATCTTAATCTTGCATTGCTTGATGTGGAAGACGACTCACTCTCCATGTGCAGCATTGACCAGAATGTCTCGCTGGAGGACTACCTGAGAGGCAGGTGGAGCCGCTCATCGAGCTTCGACTGA 2229 0.4217 MVQSSIENGGSGGRTVVVGVRIDSPSRELLTWAMFKIAQPGDVVLALHVLGNNEIVNKDGKSSLFSLVKAFESVLAVYEGFCNLKQVELKMKICRGSSVRKILVREAIACSATHVIVGTPHGLHKIRPGTTVAKYCAKKLSKECWVLGINNGKIVFKRDGSPATHAHLKGIELDHKNGLLDSIHRRLSKSAKVLNDEGNGQIFSDHSLAKIFLDSTENKSCSICGPTSAPDSSCLENAEDSSTDGDNQNSLAIVPVQTNDSVSRARTLHCRELPELKPGWPLLHRTILNRRHSTERSLLHQISVVQWAMQLPCRNLSYSTDQDLKTNNYDGSQDQSLALDSKTGALVPVDTKIGTAFSPERNSRSIPKELEGLHDRYASSCRLFEYQELVSATSNFLPENLIGKGGSSQVYRGCLPDGKELAVKILKPSEDVLEEFVLEIEIITTLHHKNIISLIGFCFEDANLLLVYDFLSRGSLEENLHGNKKNPLVFGWNERYKVAMGVAEALEYLHNNDGQPVIHRDVKSSNVLLSEDFEPQLSDFGLARWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPISGDFPKGQESLVMWASPILNSGKVSQLLDPGLGDNYDHEEMERMVLAATLSIRRAPRARPQINIISKLLQGDADVIKWARLEVSALVAPEMLDDETCPASNLQSHLNLALLDVEDDSLSMCSIDQNVSLEDYLRGRWSRSSSFD* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1063 742 Pfam Protein kinase domain 400 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1063 742 ProSitePatterns Protein kinases ATP-binding region signature. 402 424 IPR017441 GO:0005524
Lan9g1063 742 MobiDBLite consensus disorder prediction 227 249 - -
Lan9g1063 742 Gene3D Transferase(Phosphotransferase) domain 1 471 677 - -
Lan9g1063 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 517 529 IPR008271 GO:0004672|GO:0006468
Lan9g1063 742 SUPERFAMILY Protein kinase-like (PK-like) 377 660 IPR011009 -
Lan9g1063 742 Gene3D Phosphorylase Kinase; domain 1 362 470 - -
Lan9g1063 742 SMART serkin_6 396 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1063 742 PANTHER OS01G0253100 PROTEIN 7 736 IPR045271 GO:0004714|GO:0006468
Lan9g1063 742 ProSiteProfiles Protein kinase domain profile. 396 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1063 742 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 7 736 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1063 Lan-Chr9 17860100 17863922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1063 383 667 Trihelix Transcription Factor Family AT1G68690 46.416 8.74e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lan9g1063 Pkinase 5.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1063 - - aprc:113846853 1163.67