Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1061 ATGGAGCATGGAGATTCCTTCTCTCACAATGGCCAGAACACAAAACCAAGCTCTGGAAACTCCTCAAGAAGCAACCCAATGTGGGACAAATATGCCAGTTTACCTCATGCCAAAGTGATGAAAATAATGCGTCAAGTGCTTCCAAAAGATGCAGGAATCTCTGATGATGCTGTGGACACAGTTCAAAAGTGTGCATCTGAATTTATTGCCTTCATCACTGATGCAGCCATTGAGCATTCCAAACTTGACAAAAGGATGACAGTTTCAGCTGAGGACTTGCTTTTCGTGATGGAAAATATGGGTTTTGATGACTATGTTCCTCCACTTACTCTTTTTCTCGAACGTTATCGTAAACAATCCGTGCAACATGGTGTTCCAAATGTTGGGACTCCGCCGCCACCGTCACCACCACCAACGTTGCCGCAATCAGAAATCACTAATAAAACAAGCTTGGATATGTTCTATGAAGATGGGGTTGGTGATGTTTAG 489 0.4335 MEHGDSFSHNGQNTKPSSGNSSRSNPMWDKYASLPHAKVMKIMRQVLPKDAGISDDAVDTVQKCASEFIAFITDAAIEHSKLDKRMTVSAEDLLFVMENMGFDDYVPPLTLFLERYRKQSVQHGVPNVGTPPPPSPPPTLPQSEITNKTSLDMFYEDGVGDV* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1061 162 MobiDBLite consensus disorder prediction 127 141 - -
Lan9g1061 162 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 10 129 - -
Lan9g1061 162 MobiDBLite consensus disorder prediction 123 147 - -
Lan9g1061 162 SUPERFAMILY Histone-fold 33 130 IPR009072 GO:0046982
Lan9g1061 162 MobiDBLite consensus disorder prediction 7 27 - -
Lan9g1061 162 PRINTS CCAAT-binding transcription factor subunit A signature 61 79 - -
Lan9g1061 162 PRINTS CCAAT-binding transcription factor subunit A signature 80 98 - -
Lan9g1061 162 PRINTS CCAAT-binding transcription factor subunit A signature 99 117 - -
Lan9g1061 162 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 32 97 IPR003958 -
Lan9g1061 162 MobiDBLite consensus disorder prediction 1 27 - -
Lan9g1061 162 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 10 129 IPR027113 GO:0001228|GO:0006355|GO:0016602
Lan9g1061 162 Gene3D Histone, subunit A 24 126 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1061 Lan-Chr9 17820973 17822042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1061 34 125 CCAAT-HAP3 Transcription Factor Family AT5G47670 50.000 1.32e-30 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lan9g1061 CBFD_NFYB_HMF 5.2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1061 K08065 - cpap:110820722 107.842