Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1056 ATGGACTCGCCGCCGATGACTCCGGAGAACTTACCGTTCTCTGAGGCGGAGAAGATAATCCTCCGGTGGGACTCCACCGCGTCTGAGGAAGCGCGTGAGAGGATGATCTTCGACGGCGACCGCCAAGAGGTCGACCGTTACCTCCAAGCCGTTGATGAAATCCAACGCTCCATCTCCGACACCTCCATCTCCGACGACCAGAATAAAGTCAACTCCGCCGTTCAGATCGCCATGGCTCGCCTCGAAGACGAGTTCCGCAACATCCTCATCTCTCACACTATCCCCATTGAAGCTGATTCCCTCACCGAACCAGACCAAGACCAACAACAACAACAACAACAACAACAAGCTTCTTCATTTTCATCTTCATCTTCTCCGATTTCTCATGTTACTAATGATGATAGTAACTATGTTAACGATGAAGCGAATAAGCTATTTCGATTTAACAGCGAAGGAACTGCTTCTAACGTAAGTGTGAATAGTAGTTACCGTTCAACGAGTAGTTTTCGTGAAATAGATCTGATTCCATCTGATACAGTCTACGATCTTCGCTGCATCGCGGAACGAATGATCTCTTCAGGTTACTTACGTGAATGCATTCAGGTTTACGGAAGTGTGAGAAAATCAGCAGTTGATGGGAGTTTTCGAAAACTAGGGATCGAGAAATTAAGCATCGGAGATGTTCAGAGATTGGAGTGGGAGAAGCTTGAGATTAAGATAAAGCGTTGGATTAAAGCAGCTAAGGTTTGTGTTAGAACCATTTTCGCAAGTGAGAAGAGGTTATGTGAACAAATCTTTGATGGTGTTGGAACTTGTATTGATGATGCTTGTTTTATGGAAACTGTGAAAGGTCCTGCTATCCAGCTTTTCAATTTTGCTGAAGCTATTAGCATTAGTAGAAGATCACCTGAGAAATTGTTCAAGATTCTTGACCTTCATGATGCTTTTATGGATTTGATACCTGATATTGATCTTGTGTTTGATTCGAAATCATCCGATTCGATTCGGGTTCAAGCGGCTGAGATTCTTTCTAGGCTTGCTGAGGCTGCTAGAGGGATTTTATCTGAGTTTGAGAATGCTGTGTTGAGGGAACCTTCTAAGGTTCCTGTACCTGGTGGCACAATTCACCCTTTGACTAGGTATGTCATGAATTATATCAGTTTGATCTCTGATTACAAGATAACTTTGAATGATCTTATAGTGTCTAAGCCTTCAATTGGGTCAAGAAATTCAGGTGATCCTTCCACACCAGACATTGATTTTGAAGAGGTTGATGGGAAAACCCCTTTGGCTATTCATTTGATTTGGATTATTGTGAATTTGCAGTTTAATTTGGATGGTAAATCTAAGCATTATAAAGATGCATCTTTGTTACACTTGTTTATAATGAACAATGTGCACTACATTGTTCAAAAGGTGAGAGGTTCTGTTGAATTGAGGGAGTTGATTGGTGATGATTATTTGAGGAAGCTTACTGCGAAGTTTCGGCAGGCTGCTACTAGTTACCAGAGGGCAACTTGGGTGAGGGTGTTGCATTGTTTGAGAGATGAAGGGTTGCATGTGAGTGGTGGTTTTTCTTCGGGGGTGTCAAAGAGTGCTTTGAGAGAAAGGTTCAAGGCTTTCAATGCTATTTTTGAAGAGGTTCATAGGATTCAATGTGTTTGGTTGATACCAGATTCTCAGTTAAGGGAAGAGCTCCAAATATCGATATCCGAGAAGTTGATACCGGCTTATAGGTCATTTCTTGGGCGGTTCAGAAGCCATATAGAGAGTGGAAAACATCCAGAGAATTACATTAAATATTCTGTTGAAGACCTGGAGGATGCTGTTTTGGATTTTTTTGAAGGAATCCCTGTTTCTCAGCACTTGAGGAGGAGATCTAATTGA 1887 0.4218 MDSPPMTPENLPFSEAEKIILRWDSTASEEARERMIFDGDRQEVDRYLQAVDEIQRSISDTSISDDQNKVNSAVQIAMARLEDEFRNILISHTIPIEADSLTEPDQDQQQQQQQQQASSFSSSSSPISHVTNDDSNYVNDEANKLFRFNSEGTASNVSVNSSYRSTSSFREIDLIPSDTVYDLRCIAERMISSGYLRECIQVYGSVRKSAVDGSFRKLGIEKLSIGDVQRLEWEKLEIKIKRWIKAAKVCVRTIFASEKRLCEQIFDGVGTCIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDAFMDLIPDIDLVFDSKSSDSIRVQAAEILSRLAEAARGILSEFENAVLREPSKVPVPGGTIHPLTRYVMNYISLISDYKITLNDLIVSKPSIGSRNSGDPSTPDIDFEEVDGKTPLAIHLIWIIVNLQFNLDGKSKHYKDASLLHLFIMNNVHYIVQKVRGSVELRELIGDDYLRKLTAKFRQAATSYQRATWVRVLHCLRDEGLHVSGGFSSGVSKSALRERFKAFNAIFEEVHRIQCVWLIPDSQLREELQISISEKLIPAYRSFLGRFRSHIESGKHPENYIKYSVEDLEDAVLDFFEGIPVSQHLRRRSN* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1056 628 MobiDBLite consensus disorder prediction 101 136 - -
Lan9g1056 628 Pfam Exo70 exocyst complex subunit 241 610 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lan9g1056 628 Gene3D Exocyst complex component Exo70 106 624 - -
Lan9g1056 628 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 627 IPR004140 GO:0000145|GO:0006887
Lan9g1056 628 SUPERFAMILY Cullin repeat-like 17 615 IPR016159 -
Lan9g1056 628 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 9 627 - -
Lan9g1056 628 MobiDBLite consensus disorder prediction 102 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1056 Lan-Chr9 17760333 17762688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1056 13 627 EXO70 exocyst subunit family AT1G72470 69.854 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1056 K07195 - gmx:100808671 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0555 11 4320208 4322590 Lan9g1056 9 17760333 17762688 LSH