Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1055 ATGGCCTTAGCGGGGGTAATAACCCTCCAGCCAAATCTCCTCTTCATCTTCATCACAACCATGTGTTTTAACAATTTTCCAATGACATATTCTATGTCAGAAGCTGAAGCTTTGCTGAGTCTCAAAGAATCATTTTCCAATGCTGAAGCTCTTGATAATTGGGTGGCTGATTCACCACCTTGTAGTGAAGATGATCAATGGGTAGGTCTTGTATGCAACAATGGCCAAGTCACCGGGCTTCGCCTCGGAGACATGGGATTACAAGGGAAAATTCATGTTGATGCATTGCTTGAACTTAAGTCTCTTAGAACTATTAGCCTTGTGAGAAACTCTTTCAATGGTTCTATACCAGAACTTAGTAAAATTGGTTTCTTGAAAGCAATTTATTTGTCAGGGAATAAGTTCTCGGGCAAAATTCGCGAAGATTACTTTCAAGAAATGAGGTCTTTGAAGAAACTGTGGCTTGATGATAATGAATTCACAGGCCATATTCCTTCATCATTGTCTAAGATGCCACAACTTATGGAGTTACATTTGGAGAATAACCAGTTTAATGGAACTATTCTGGATCTTGGTAACCCTGCATTGGTTGATTTCAATGTGTCAAACAACAAATTGGAAGGTGGAGTTCCAGCTAGTTTATTGAAATTCAATGAGAGTTCCTTTGAAGGGAATTCTGGTCTTTGTGGTGAGAAGCTTGGAACAAAATGTGATGAAAATGGTAAAAAAGAGGCACCAAGTCCCTTTCATGCAAAAGAAAATGGAGACACAATAATCATTCATAATGGTAATGCTCCTCCAACAGATAAAGGTAAGATTCGTGCAGCTCAAATTGCTGGCATTGTAGCAGCATGTGTAGTGGTTCTTTTGATTGTTGCTTTGTTGTTTGTGAGATCAAAGAAAAAGAAGGGTGATGTAGATTTTGATGGTATAATTGGAAGAGAGAATAATGAAGAAGCAGTGGAAGTTCAAGTAGCTGCACCAGTGAAAAGAGAAGTTTCTGCTGAACCAATTAGAAAATCAACATCTAGCAGAAAAGGAGGGTCTGGACATCATAGTGTTAAGGGTGTTGGAGAACTTGTGATGATAAATGAGGAAAAGGGTGCTTTTGGTTTACCAGATTTGATGAAAGCAGCTGCAGAAGTGTTAGGAAATGGAGCATTTGGATCTTCTTACAAAGCAGTGATGACTAATGGATTGGCTGTTGTGGTGAAAAGGACTAGAGAGATGAACGCATTGGAAAAAGATGGTTTTGATGCAGAGATGAAGAAGATTTCAAATCTTAAACACTGGAATGTTTTGACCCCTTTAGCTTATCATTACAGAAAGGATGAGAAACTAGTAATCTCTGAGTATGTTCCCAGAGGCAGTTTACTGTTTTTGCTGCATGGTGATAGGGGACCATCACATGCTGAACTGGATTGGCCTGCACGTTTGAAGATTGTAAAAGGAATAGCCGACGGGATGCGATATCTTCACACGGAACTCGCTTCCTCTGATCTACCACATGGTAATCTCAAGTCCAGCAATGTTCTCCTTGGACCAGAATATGAACCACTTATAGTAGATTATGGTTTTAGTCACCTAATCAACCCTGCTAGTGCAACACAAGCACTATTTGCTTATAAGGCTCCTGAAGCAATATCACAAGGCCAAATTTCACATAAATGTGATGTTTACTGTCTTGGTGTTGTTATACTTGAAATACTCACTGGAAAATTTCCTTCTCAATATCTCAGCAATGGAAAAGGTGGAACTGATGTAGTGCAATGGGTTGCATCAGCAATATCTGAGCGCAGAGAATTGGAACTTCTTGATCCTGAGATTGCAACCTCAAAGAATAATAACTCACAAGTTCAAATGGAACAACTACTTCATATTGCTGCTGCTTGCACTGCAAGTAACCCTCACCAACGCTTACAAATGTCAGAAGCTATTAGAAGAATAGAGGATATAATCAATGAGAGTTGTAAAGGATCAAGAACAATAGAAATCTTACCATCTCTAAGAGATGGTTATGCAGATTCTCATTATGTATTAGGAACACATGAACATGGTGGTCAATCTAAGAGGAGACATGGATCAAATAGCTTTGGAAGCAGGGATAACTTTGAATATGGCATGTCCTAG 2130 0.392 MALAGVITLQPNLLFIFITTMCFNNFPMTYSMSEAEALLSLKESFSNAEALDNWVADSPPCSEDDQWVGLVCNNGQVTGLRLGDMGLQGKIHVDALLELKSLRTISLVRNSFNGSIPELSKIGFLKAIYLSGNKFSGKIREDYFQEMRSLKKLWLDDNEFTGHIPSSLSKMPQLMELHLENNQFNGTILDLGNPALVDFNVSNNKLEGGVPASLLKFNESSFEGNSGLCGEKLGTKCDENGKKEAPSPFHAKENGDTIIIHNGNAPPTDKGKIRAAQIAGIVAACVVVLLIVALLFVRSKKKKGDVDFDGIIGRENNEEAVEVQVAAPVKREVSAEPIRKSTSSRKGGSGHHSVKGVGELVMINEEKGAFGLPDLMKAAAEVLGNGAFGSSYKAVMTNGLAVVVKRTREMNALEKDGFDAEMKKISNLKHWNVLTPLAYHYRKDEKLVISEYVPRGSLLFLLHGDRGPSHAELDWPARLKIVKGIADGMRYLHTELASSDLPHGNLKSSNVLLGPEYEPLIVDYGFSHLINPASATQALFAYKAPEAISQGQISHKCDVYCLGVVILEILTGKFPSQYLSNGKGGTDVVQWVASAISERRELELLDPEIATSKNNNSQVQMEQLLHIAAACTASNPHQRLQMSEAIRRIEDIINESCKGSRTIEILPSLRDGYADSHYVLGTHEHGGQSKRRHGSNSFGSRDNFEYGMS* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1055 709 MobiDBLite consensus disorder prediction 684 698 - -
Lan9g1055 709 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 9 654 - -
Lan9g1055 709 Gene3D Ribonuclease Inhibitor 32 192 IPR032675 -
Lan9g1055 709 MobiDBLite consensus disorder prediction 682 709 - -
Lan9g1055 709 SUPERFAMILY L domain-like 33 217 - -
Lan9g1055 709 ProSiteProfiles Protein kinase domain profile. 377 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1055 709 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 654 - -
Lan9g1055 709 Pfam Leucine rich repeat N-terminal domain 33 73 IPR013210 -
Lan9g1055 709 Gene3D Phosphorylase Kinase; domain 1 352 452 - -
Lan9g1055 709 MobiDBLite consensus disorder prediction 334 353 - -
Lan9g1055 709 Pfam Leucine rich repeat 125 184 IPR001611 GO:0005515
Lan9g1055 709 SUPERFAMILY Protein kinase-like (PK-like) 381 648 IPR011009 -
Lan9g1055 709 Pfam Protein kinase domain 381 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1055 709 Gene3D Transferase(Phosphotransferase) domain 1 453 664 - -
Lan9g1055 709 Gene3D Ribonuclease Inhibitor 193 241 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1055 Lan-Chr9 17745267 17748420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1055 13 652 Receptor kinase-like Gene Family AT3G42880 45.884 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan9g1055 Pkinase 2.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1055 - - lang:109337801 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0556 11 4331072 4334396 Lan9g1055 9 17745267 17748420 LSH