Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1054 ATGACAAGTTTCCCTGATACGGTGGTGGGTCGCCGGAGGTCCGGCAAGGCATCGGAAAATTCCAATTTCTCACAAACTTGTAGCATTTTGAGTCACTTCTTGAAGGAAAAACGCAGCTCTGAAGCTTCTACACTTGGAATTGGTAGAAAAATTGAGCCTAAGGCAAATATGAAGCATTTGGTATCTAAACTGCAAAGTTCAGATGAGGCTTTGAGACTAAACGCTTCAGCTTTGGATTTCCTTCCCCAGCTTGTGGAAAACCCATGCATTAAGAAGTCTAAAGATAGGACACCAGATCCTGAAACTTCACAATTGACAATATTCTATGCTGGAAAAATGCTAGTATTTGATGCTTTTCTGCCTGAGAGAGCAACAGAGGTAATGGAATTAGCCACCAAGCTAGCTTCTGATAATTCCAGCATCAAAGAAAGTTCCCCTAGTGCTTCTGTTGCTACTGAAAATTTAAAAGGGTCCAAAGTGCCTCAAACAAACACTGCCTCTGAAACAACTCGACCAGGCACATTTTTTGTGAAAACAGATATGAGGTATCCAAGGAGAGCTTCACTTCTAAAGTTCCTAGAGAAAAGGAAAGAAAGGGTCATTGCTAAAGGGCCTTACCAAATTATGAACATCAACCCCACCATGCATGAGGGAAACAGTTCAGAGGGTGGTGAACCTGAAGAGCAGTGTTCCAAACAATTAGACCTTAACTTGTAG 717 0.4198 MTSFPDTVVGRRRSGKASENSNFSQTCSILSHFLKEKRSSEASTLGIGRKIEPKANMKHLVSKLQSSDEALRLNASALDFLPQLVENPCIKKSKDRTPDPETSQLTIFYAGKMLVFDAFLPERATEVMELATKLASDNSSIKESSPSASVATENLKGSKVPQTNTASETTRPGTFFVKTDMRYPRRASLLKFLEKRKERVIAKGPYQIMNINPTMHEGNSSEGGEPEEQCSKQLDLNL* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1054 238 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 8 231 - -
Lan9g1054 238 ProSiteProfiles Tify domain profile. 98 133 IPR010399 -
Lan9g1054 238 MobiDBLite consensus disorder prediction 1 21 - -
Lan9g1054 238 MobiDBLite consensus disorder prediction 212 238 - -
Lan9g1054 238 MobiDBLite consensus disorder prediction 137 170 - -
Lan9g1054 238 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 8 231 IPR040390 -
Lan9g1054 238 Pfam tify domain 100 131 IPR010399 -
Lan9g1054 238 SMART tify_2 98 133 IPR010399 -
Lan9g1054 238 MobiDBLite consensus disorder prediction 210 238 - -
Lan9g1054 238 Pfam Jas motif 185 207 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1054 Lan-Chr9 17740403 17742737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1054 8 210 Tify Gene Family AT1G19180 30.973 4.05e-19 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lan9g1054 tify 1.6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1054 K13464 - gmx:100778559 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0557 11 4338103 4341244 Lan9g1054 9 17740403 17742737 LSH