Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1024 ATGGTGGTGGATCGAAGGCTGGTGCTGGTTTTGGTCAGCACCTGCATTATTGGTTCGATCCCTATTCCCACCAACGGTGACACAGATCAAAGTGATGTTACTTCTCTAAATGTTATGTTTCAAAGTATGAACTCACCATCCCAGCTAAATTGGCCTCAAAATGGTAATGATCCTTGTGGACAGTCTTGGAAAGGCATAACTTGCTCAGGCAACCGAGTCACAGAGATTAAGCTACCTGGTCTTGAACTAAGTGGAACTTTGGGTTACCAATTACAATCCTTGACATCCGTGACCACCCTAGACTTGAGTAACAACAATCTCGGTGGAGCTATACCATATCAACTTCCTCCAAATGTGGCGCGCTTAAATCTTGCTAATAATAATTTCAGTGGGATGGTTCCATATTCTCTTTCAGATATGACTTCTCTTACGGACCTGAATCTTGGTCATAATCAGCTCCAGCAAGCACTGAATGTCAACTTCCAAAAGCTTACTTCCCTCTCTACATTGGATCTCTCTTTCAATTCTCTTACAGGAGACCTCCCTCAGACTATAAGCTCACTTTCAAGCACATCCACCATGTATCTACAAAACAACCAGTTTACAGGTACCATTAACGTCCTAGCGACTCTGCCTCTTGAGACTCTGAATGTGGAAAACAACAAGTTTACAGGCTGGATACCAGAACAGTTGAAAAGCATAAACATAAAAACGGGCGGTAATACATGGAGCTCAGGACCTGCACCCCCACCTCCTCCTGGCACACCTCCAGCAACAAAAACCAACCCGAATCACAAATCTGGTGGGCATAGCACCCCTTCAGGTTCTGGCACAAGTGACGGGGGCAAAAAATCTGGTATTGGAGGTGGTGCCATTGCTGGAATTGTGATCAGCATCTTGGTTGTTGGGGCAATAGTAGCATTCTTTCTGGTGAAGAGAAAATCCAAGAAGTCGTCTTCAGACATGGAAAAGCTTGACAATCAGCCCTTGGCTCCTGTTACCTCAAATGGAACGCATGAATCGAATTCTATGCAATCTTCATCTGTAATTGATTTGAAGACATTTGATCCTCCTGTGGCTCCAATAATTCTAAAACCCCCACCTTTGGATCGTCATAAATCAGCTGATGAGGAGGAATTTTCAAATAAGCCCATTATCGCGAAGAAGACCGTACCAGCTCCTGCAAATGTGAAAGCATATTCCATAGCCGACTTGCAGATTGCTACTGGAAGCTTCAGTGTGGATCAACTTGTTGGCGAGGGTTCTTTTGGACGTGTATACCGTGCTCATTTTGATGATGGAAAGGTTCTTGCAGTAAAGAAGATAGATTCATCTGTCCTTCCCAATGATTTGTCTGAAGATTTTTCAGAAATCGTTTCTAGTATCTCTCATTTGCATCATCCAAATGTGACCGAGCTTGAAGGTTATTGTTCAGAGCATGGACAACACCTCCTAGTCTATGAGTTTCACAAAAATGGGTCACTGCATGACTTCCTTCACCTACCTGACGAGTATAGTAAACCATTGATATGGAATACCCGTGTCAAGATTGCTTTAGGGACTGCACGCGCTTTAGAGTACCTACACGAAGTTTGTTCACCATCAGTTGTTCACATGAACATTAAGTCAGCCAATATATTGCTTGATACAGAACTTAATCCTCATCTTTCAGACAGTGGATTGGCAAGCTATATTCCAAATGCCGACCAGGTATTAACCAATAATGCTGGATCCGGATATGATGCTCCCGAAGTAGGCTTGTCTGGTCATTACAGTCTTAAGAGTGATGTCTACAGCTTTGGAGTTGTCATGTTGGAACTTCTTAGTGGACGGAAACCATTTGATAGCTCAAGGCCGAGATTTGAACAGTCTTTGGTTCGATGGGCAACACCTCAACTTCATGACATTGATGCATTGGCTAAAATGGTTGATCCTGCACTGGAGGGGTTATACCCTATTAAGTCTCTTTCTCGCTTTGCTGATGTTGTTGCTCTTTGTGTTCAGCCGGAGCCAGAATTCCGACCACCAATGTCAGAAGTGGTTCAAGCACTGGTTCGATTAGTGCAACGAGCTAACATGAGCAAGCGGACATATGGAGCTGATCAAGGAGGATCCAACCAAGGTGGTGATGATCCAGAAGACATGTAA 2148 0.4381 MVVDRRLVLVLVSTCIIGSIPIPTNGDTDQSDVTSLNVMFQSMNSPSQLNWPQNGNDPCGQSWKGITCSGNRVTEIKLPGLELSGTLGYQLQSLTSVTTLDLSNNNLGGAIPYQLPPNVARLNLANNNFSGMVPYSLSDMTSLTDLNLGHNQLQQALNVNFQKLTSLSTLDLSFNSLTGDLPQTISSLSSTSTMYLQNNQFTGTINVLATLPLETLNVENNKFTGWIPEQLKSINIKTGGNTWSSGPAPPPPPGTPPATKTNPNHKSGGHSTPSGSGTSDGGKKSGIGGGAIAGIVISILVVGAIVAFFLVKRKSKKSSSDMEKLDNQPLAPVTSNGTHESNSMQSSSVIDLKTFDPPVAPIILKPPPLDRHKSADEEEFSNKPIIAKKTVPAPANVKAYSIADLQIATGSFSVDQLVGEGSFGRVYRAHFDDGKVLAVKKIDSSVLPNDLSEDFSEIVSSISHLHHPNVTELEGYCSEHGQHLLVYEFHKNGSLHDFLHLPDEYSKPLIWNTRVKIALGTARALEYLHEVCSPSVVHMNIKSANILLDTELNPHLSDSGLASYIPNADQVLTNNAGSGYDAPEVGLSGHYSLKSDVYSFGVVMLELLSGRKPFDSSRPRFEQSLVRWATPQLHDIDALAKMVDPALEGLYPIKSLSRFADVVALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTYGADQGGSNQGGDDPEDM* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1024 715 Pfam Leucine rich repeat 96 153 IPR001611 GO:0005515
Lan9g1024 715 ProSiteProfiles Protein kinase domain profile. 412 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1024 715 Pfam Protein tyrosine and serine/threonine kinase 414 684 IPR001245 GO:0004672|GO:0006468
Lan9g1024 715 ProSitePatterns Protein kinases ATP-binding region signature. 418 441 IPR017441 GO:0005524
Lan9g1024 715 SUPERFAMILY Protein kinase-like (PK-like) 395 684 IPR011009 -
Lan9g1024 715 Gene3D Ribonuclease Inhibitor 181 245 IPR032675 -
Lan9g1024 715 MobiDBLite consensus disorder prediction 260 281 - -
Lan9g1024 715 MobiDBLite consensus disorder prediction 318 347 - -
Lan9g1024 715 MobiDBLite consensus disorder prediction 329 347 - -
Lan9g1024 715 Gene3D Ribonuclease Inhibitor 29 180 IPR032675 -
Lan9g1024 715 SMART LRR_typ_2 94 122 IPR003591 -
Lan9g1024 715 SMART LRR_typ_2 140 163 IPR003591 -
Lan9g1024 715 SMART LRR_typ_2 164 188 IPR003591 -
Lan9g1024 715 PANTHER OS01G0253100 PROTEIN 18 712 IPR045271 GO:0004714|GO:0006468
Lan9g1024 715 Pfam Leucine Rich Repeat 166 188 IPR001611 GO:0005515
Lan9g1024 715 MobiDBLite consensus disorder prediction 245 259 - -
Lan9g1024 715 MobiDBLite consensus disorder prediction 696 715 - -
Lan9g1024 715 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 18 712 - -
Lan9g1024 715 Gene3D Transferase(Phosphotransferase) domain 1 491 705 - -
Lan9g1024 715 SUPERFAMILY L domain-like 29 231 - -
Lan9g1024 715 PRINTS Leucine-rich repeat signature 97 110 - -
Lan9g1024 715 PRINTS Leucine-rich repeat signature 164 177 - -
Lan9g1024 715 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Lan9g1024 715 Gene3D Phosphorylase Kinase; domain 1 373 489 - -
Lan9g1024 715 MobiDBLite consensus disorder prediction 237 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1024 Lan-Chr9 17481203 17488710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1024 8 701 Strubbelig Receptor Gene Family AT1G53730 66.856 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lan9g1024 Pkinase 9.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1024 - - gmx:100780323 1091.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0594 11 4710526 4717917 Lan9g1024 9 17481203 17488710 LSH
Lan9g1024 9 17481203 17488710 Lan2g0873 2 19118762 19126700 LSH
Lan16g1129 16 18361185 18369032 Lan9g1024 9 17481203 17488710 PCT
Lan9g1024 9 17481203 17488710 Lan16g1129 16 18361185 18369032 PCT