Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1019 ATGTTACCTATTGTTGTTCTCTCAACTTTTGTTACTATTAGTTTTGCACTACTTGTGTGCTTGCCTATTTCTCATTCCCTCCAAGAACAAAGAAAACTATTACAACCAACTTTGATTCCAAATTCTTGCAATGAAACATGTGGAAAACTCCATGTTCCTTTTCCATTCTATGTGAACATTTCTTGTGTGTCAATCTCTAATGCTTTCCACCTCACTTGCTCAAATTCCTCTACCCTTTTGATCAAAATTGGATCAGAAAGTTATCCACTGTTGGAATTCTTCCAAGATGGTTTGTTAGTAGACTTTCCAGGCACATCATCATGCCGCCAGTACAATGACTTGAACTCATTTGGTAACAAGTTTTCGGGAAAAGACCACTTCGGAGTTTCGGTTGACAATGTTATAGGCCTCTATGACTGTGAGGATTCTTCTCTTTGCAAAGCGGATTGCGAAACAGTTGATCTTCCTGGTTGTGATGGAAGCAGTGGTGGTAGCCTTGGTTGCTGTTATCCACTCTCAGATCATAGCATATGGCATGTTGGACAAGGCTTTTCGGTGTTTTCTCAGTTTGGATGCAGGGGATTTTCTAGTTGGGCTGTTTTGAGAGGCTCGAATTCAGGAAATCGCGGGGTCAAGTTAGAATGGGCTATTGCAAGAAACTCATCCAATGAAGTTTGTGCAAGGAATGCAGATATGGTAAATGCTACATCAATTGAAGGTGGTGTAAGGTGTGTTTGTCAAGATGGATATTTTGGTGATGGGTTTGCTAATGGATCAGGATGCTTGCAGTCGTGTATCAAGAATGGACAGGAAGCATATGGAAATGATTGCTTCATCAAAAGACATGATCAAAGGAAAATAGTTATCATTGCTGGAATCTTCGGTCCAGTTCTCATTGTTGCCTCCTTGGTTGCACTATTTTATCTTCTTAAAAGACCAGGAAAACCCGGGATGTTAGACACCGAGCAGGCTTATTTCCACAACCATTCAATCCGAAAAGCTTGCAGATCTCGATTATTTAGCCACCAAGAGCTAGAGGAAGCCACCAACGGCTTCGAAGAGAGCCGAAAACTCATGCAAAGTACTAATGGGACAATGTTTGCTGGAGTTCTTGGAGATGGATCTCATGTAGCCATACACAAGTTAAAATGTGAAAATGAAAGAGACATAATTCAAGTCCTGCCACAAATTGAGGCTCTATCTGATGTTGTACATAGGAACATGGCATGCCTTATTGGATGCTGCATTGACTCTGGCTACACTCCTCTAGTGGTGTATGAATATCCTGCAAATGGTACCTTGAAGGAGCATTTATACCAAAGCAAGGGACATAAACATGGTTTAGATTGGCATAAGAGGTTGAATATTGCTACAGAAACTGCTTGTGTTGTTGCATTCTTACATTATGAGAATTCTCCTCCCATATTCCACCATAACCTTACATCTAGTTGCATCTTCCTAGATGGTGATTTTTCTGTCAAGATTGCGGGATTTGGGCTACTTAATTCCAATTTTAATCACGATTCTCAGATGTACAAAAATCGCGAATGCTTTCACTTATCCAAAAATGATGTCTATGATATGGGAGTGGTACTTCTTGAGATTATCTCAGGTTCAAATCACCTAGACTTACCAAAATTAGCCTTGCAAAAAATAAAAGATGGAAAGCTAGAAGAAATTGTCGATACACTTCTTTACTATCACGAGCAACCCTATTATCGACAAGAGCAGATACAGAAAATTGCAGACCTTGCAACAAGATGCTTGCTATTTGGTGCAGATGGAAAGCTAGGAATTATCGATGTCGCGAGAGAATTAGTACACATAACTAAAGAGTCTATTGATGGGGAGTTGAGAGGACCTATAATGGAGGTGACATTCTCAAATTCAAGCCTTCTTCAAATGATAACAACGTGTCATGATTCAATGAATGCTCCTTGA 1941 0.3998 MLPIVVLSTFVTISFALLVCLPISHSLQEQRKLLQPTLIPNSCNETCGKLHVPFPFYVNISCVSISNAFHLTCSNSSTLLIKIGSESYPLLEFFQDGLLVDFPGTSSCRQYNDLNSFGNKFSGKDHFGVSVDNVIGLYDCEDSSLCKADCETVDLPGCDGSSGGSLGCCYPLSDHSIWHVGQGFSVFSQFGCRGFSSWAVLRGSNSGNRGVKLEWAIARNSSNEVCARNADMVNATSIEGGVRCVCQDGYFGDGFANGSGCLQSCIKNGQEAYGNDCFIKRHDQRKIVIIAGIFGPVLIVASLVALFYLLKRPGKPGMLDTEQAYFHNHSIRKACRSRLFSHQELEEATNGFEESRKLMQSTNGTMFAGVLGDGSHVAIHKLKCENERDIIQVLPQIEALSDVVHRNMACLIGCCIDSGYTPLVVYEYPANGTLKEHLYQSKGHKHGLDWHKRLNIATETACVVAFLHYENSPPIFHHNLTSSCIFLDGDFSVKIAGFGLLNSNFNHDSQMYKNRECFHLSKNDVYDMGVVLLEIISGSNHLDLPKLALQKIKDGKLEEIVDTLLYYHEQPYYRQEQIQKIADLATRCLLFGADGKLGIIDVARELVHITKESIDGELRGPIMEVTFSNSSLLQMITTCHDSMNAP* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1019 646 Gene3D Laminin 214 257 - -
Lan9g1019 646 Gene3D Transferase(Phosphotransferase) domain 1 430 615 - -
Lan9g1019 646 Pfam Wall-associated receptor kinase galacturonan-binding 43 92 IPR025287 GO:0030247
Lan9g1019 646 Gene3D Phosphorylase Kinase; domain 1 323 428 - -
Lan9g1019 646 SUPERFAMILY Protein kinase-like (PK-like) 335 606 IPR011009 -
Lan9g1019 646 PANTHER OS10G0351500 PROTEIN 52 638 - -
Lan9g1019 646 ProSiteProfiles Protein kinase domain profile. 352 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1019 646 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 52 638 IPR045274 GO:0007166
Lan9g1019 646 Pfam Protein tyrosine and serine/threonine kinase 356 537 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1019 Lan-Chr9 17234265 17237245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1019 43 609 Receptor kinase-like Gene Family AT2G23450 30.283 6.91e-64 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lan9g1019 PK_Tyr_Ser-Thr 3.4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1019 - - gmx:100810557 947.962