LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan9g1012	ATGGCTACCAATATTTGTCTCTGTCTACGTTTGTCCATCACATTTCTTCACCTTACCTTTGTCACATTAGCTCAGTTAGACAATTATATCATTCACATGGATTTATCAGCCATGCCCAAACCCTTTTCCAATCAACACAATTGGTACCTAGCCACTCTTTTTTCTGCACTGAACAATTCTGAATTCACAACCAATAATCTTAACTCTTATTCTTCTAAGCATATCTACACTTACACCAATGTCATGAATGGTTTCAGTGCAAGTTTGACACCTTTAGAACTTGAAGCTCTAAAAAACTCTCCAGGTTACATTTCATCCATAAGAGACTTGCCTGTGAAACCAGACACTACACACTCACCCCAATTCCTTGGCCTCAATCCCTTTTCAGGAGCATGGCCAGCCTCAGAGTATGGCAAAGATGTAATTGTTGGTATGTTGGACACTGGAGTGTGGCCAGAGAGCCGAAGTTTCGAAGATAATGGACTAACTAAAATTCCTTCAAGATGGAAAGGCCAATGTGAAAACAGCATCCAATTCAATTCATCACTTTGCAACAACAAACTCATTGGAGCTAAGTTCTTTAACAAAGGACTACTTGCGAAAAACCCAAACATCACCATAGCGAAGTATAACTCCACGCGCGACACCGAAGGTCATGGGACTCACACTTCAAGTACTGCAGCTGGAAGCAAAGTTAATGATGTGTCCTACTTTGGTTATGCAAGTGGAACAGCAAGTGGAATAGCTTCGTCGGCGCGTGTAGCTATATACAAAACCTTATGGGAAATTGGAGGATACCCTTCTGATATAATAGCTGCAATTGATAGTGCAATAGAAGATGGTGTAGATGTTCTTTCATTATCATTTGGCTTGGATCAAATACCTTTGTACAAAGACCCTGTTGCTATTGCCACTTTTGCAGCCATGGAGAGAGGCATTTTTGTGTCCACATCAGCAGGGAACGAAGGGCCTTATCTTAAAACTCTACATAATGGAACACCATGGGTTATAACCGCTGCCGCTAGCACTTTGGATCGCGAATATCACGGGACTCTTTCTCTTGGAAATTCAGTCCAAATCACTGGCTTGTCTCTTTATCCATTGGACTTCTCCCCTGGTCATGTTCCAATTGTTTTTATGGGGCAGTGCAACAATTTGAGGCAACTAGTCAAAGTGAGGAACAAGATTGTGGTGTGTGAAGACAAGAATGAAACACTTCCTGACCAAGTAGCAAATGTTGAAACTGCACAAGTTGTTGGTGCTGTTTTTATATCAAACAGCTCTGACTTATATGCATTCTACTTACAGAACAGTTTCCCTTCCATCATTATTAGTCCCATAAATGGCGAAATTGTCAAAGGTTACATAAAGAGTAATAAACTTGATGCAAAAGCAAGCATGTATTTTAAGATAACTACTGTTGGTACAAGACCAGCACCAAGTGTGGATAGCTATAGTTCTAGAGGGCCATCATATAGTTGTCCCTATGTATTGAAGCCAGACATCACAGCTCCTGGTACATCAATCTTAGCTGCATGGCCTAAAAAAATTCCAGCAACAACTTTGGGGTCCAGAGATCTCTTTAGCAACTTCAACTTGTTAAGTGGTACTTCTATGTCATGCCCTCATGTTACAGGTGTAGCAGCCCTTTTGAAGGGTGCATACCCTCATTGGAGCCCTGCAGCAATTAGGTCAGCTATTATGACAACTTCAGATATATTGGACAATACATTGGAACCCATCAAAGACATTGGTCAAGGTTATGAACCAGCCTCTCCTCTAGCCATGGGAGCTGGTCATATCAACCCCAACAAAGCCCTTCACCCTGGACTTGTTTACAATGTTGGAGTACAAGATTATGTGAATCTTCTTTGTGCATTGAATTTCACTCAAAAGAAAATCACCACTATCACTAGATCCTCTTACAACAATTGTTCTAACCCTTCATTGGATCTTAACTACCCTTCTTTTATTGCTTTCTTTGATGCCAAGTATTCTCATAGTCAGTCAAAGACAAAAATACAAGAATTTGAGAGAACTGTGACAAATGTTGGGGAGGGACCAACAACCTATGTTGCTAGTGTTACACACATTGAAGGGTTTCATGTCAGTGTCATTCCCAACAAGTTGGTGTTTTGGGAGAAGAATCAGAAGCTAAGGTACAAGTTGAGGATTGAAGGTCGAAGGATGAAGAATAAGGATAAGAAAGTTGCTTTTGGATATCTCACTTGGAAGGACGTGAAGCATGTGGTTAGGAGCCCTATTGTGGTCACCACCCTCAATCTCTAG	2289	0.4102	MATNICLCLRLSITFLHLTFVTLAQLDNYIIHMDLSAMPKPFSNQHNWYLATLFSALNNSEFTTNNLNSYSSKHIYTYTNVMNGFSASLTPLELEALKNSPGYISSIRDLPVKPDTTHSPQFLGLNPFSGAWPASEYGKDVIVGMLDTGVWPESRSFEDNGLTKIPSRWKGQCENSIQFNSSLCNNKLIGAKFFNKGLLAKNPNITIAKYNSTRDTEGHGTHTSSTAAGSKVNDVSYFGYASGTASGIASSARVAIYKTLWEIGGYPSDIIAAIDSAIEDGVDVLSLSFGLDQIPLYKDPVAIATFAAMERGIFVSTSAGNEGPYLKTLHNGTPWVITAAASTLDREYHGTLSLGNSVQITGLSLYPLDFSPGHVPIVFMGQCNNLRQLVKVRNKIVVCEDKNETLPDQVANVETAQVVGAVFISNSSDLYAFYLQNSFPSIIISPINGEIVKGYIKSNKLDAKASMYFKITTVGTRPAPSVDSYSSRGPSYSCPYVLKPDITAPGTSILAAWPKKIPATTLGSRDLFSNFNLLSGTSMSCPHVTGVAALLKGAYPHWSPAAIRSAIMTTSDILDNTLEPIKDIGQGYEPASPLAMGAGHINPNKALHPGLVYNVGVQDYVNLLCALNFTQKKITTITRSSYNNCSNPSLDLNYPSFIAFFDAKYSHSQSKTKIQEFERTVTNVGEGPTTYVASVTHIEGFHVSVIPNKLVFWEKNQKLRYKLRIEGRRMKNKDKKVAFGYLTWKDVKHVVRSPIVVTTLNL*	763

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan9g1012	762	PRINTS	Subtilisin serine protease family (S8) signature	138	157	IPR015500	-
	Lan9g1012	762	PRINTS	Subtilisin serine protease family (S8) signature	215	228	IPR015500	-
	Lan9g1012	762	PRINTS	Subtilisin serine protease family (S8) signature	535	551	IPR015500	-
	Lan9g1012	762	PANTHER	PUTATIVE-RELATED	18	760	-	-
	Lan9g1012	762	Gene3D	-	345	475	-	-
	Lan9g1012	762	SUPERFAMILY	Subtilisin-like	115	611	IPR036852	GO:0004252\|GO:0006508
	Lan9g1012	762	Pfam	Peptidase inhibitor I9	29	113	IPR010259	-
	Lan9g1012	762	CDD	Peptidases_S8_3	112	572	IPR034197	-
	Lan9g1012	762	Gene3D	-	624	760	-	-
	Lan9g1012	762	ProSiteProfiles	Serine proteases, subtilase domain profile.	122	607	-	-
	Lan9g1012	762	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	22	113	IPR037045	-
	Lan9g1012	762	Pfam	Fibronectin type-III domain	651	757	IPR041469	-
	Lan9g1012	762	Gene3D	Peptidase S8/S53 domain	140	620	IPR036852	GO:0004252\|GO:0006508
	Lan9g1012	762	Pfam	Subtilase family	138	575	IPR000209	GO:0006508\|GO:0008236
	Lan9g1012	762	ProSitePatterns	Serine proteases, subtilase family, serine active site.	536	546	IPR023828	-
	Lan9g1012	762	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	18	760	IPR045051	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan9g1012	Lan-Chr9	17104242	17106682	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan9g1012	7	760	Subtilisin-like Serine Gene Family	AT5G67090	45.278	0.0	634

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan9g1012	-		-	gmx:100783026	1036.17