Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1005 ATGTATCTCTATTTGCCATATCTCATTATCATCACCTTATATATAATAGAATATCCATTACAACCTCAAACTTTGAAACCCATTGGAGCCACGTACCTAACAAACTTGAATCATAAGAAATTAAACACAAGAATTTATTGCAGCAACATGAGCAAGAAGGCACCGAAACCTCGTACCCGTGTAGGGAAGTTCGAGTTGGGAAAAACTATTGGTGAAGGAAGCTTTGCAAAGGTTAAACTAGCCAGGAACGTTGATTCTCGCGACCATGTTGCTATCAAAATCCTCGACCGTAACCACGTTCTCCGCCATAACATGATGGAGCAGCTGAAGAAAGAAATTTCAGCCATGAAGCTTATCAATCATCCAAATGTTGTCAAAATATTTGAGGTTATGGCAAGCAAAACAAAGATCTACATTGTATTGGAGTTGGTTAATGGAGGAGAACTATTTGACAAAATTGCCACAAATGGGAAACTAAAAGAGGATGAAGCAAGAAGTTATTTCCACCAACTAATCAATGCAGTTGATTATTGCCATAGTAGAGGCGTGTATCACCGAGATTTGAAGCCAGAGAATCTTCTTCTGGACTCAAATGGTGTTCTTAAAGTTTCAGATTTTGGATTGAGTACTTATGCGCAGCAAGAGGATGAACTCCTCCGCACTGCTTGTGGAACTCCGAATTATGTTGCTCCTGAGGTGCTTAAGGATAGAGGCTATGTTGGTTCTGCATCTGATATCTGGTCTTGTGGAGTCATTCTCTTTGTACTTATGGCTGGGTACTTGCCTTTTGATGAGCCAAATCATGTAGCATTATTCCGTAGAATTAGCAGAGCTGATTTCAGCTTTCCATCTTGGTTTGCGCCCAAGTTAAAGAAACTTCTGAAGCGCATTCTTGACCCGAACCCTCTTACAAGGATAAAAATAGAAGAACTCTTGGAAGATGAATGGTTCAAGAAAGGATACAAGCCAGCATCTTTTACGGAGGAAGAGGATGTAAACGTTGATGACGTAGCGGCTGCTTTCAACGATTCTAAGGACAATCTTGTGACAGAGAGAAAAGAGAAACCTGTCTCCATGAATGCTTTCGAGCTCATTTCTAGGTCACAAAGCTTCAATCTTAACAGCTTGTTTGAGAAGCAAACAGGGGTCGTAAAGCGAGAAACACATTTTACTTCACAGCACCCTGCTAACGAAATCATGTCTAAAATTGAGGAAGCTGCCAAGCCTCTAGGCTTTAATGTTCACAAGAGAGATTATAAGATGAAGCTTCAAGGTGATAAGAGTGGAAGGAAGGGCCACCTTTCAGTGGCTACTGAGGTTTTTGAAGTGGCTCCCTCCTTGCACATGGTGGAGCTGCGAAAGACCGGTGGCGACACACTTGAGTTTCACAAGTTTTACAAGAACTTTTCATCAGGGTTGCAAGACATAGTGTGGCATGCAGACGAAGAAAAATGA 1455 0.4137 MYLYLPYLIIITLYIIEYPLQPQTLKPIGATYLTNLNHKKLNTRIYCSNMSKKAPKPRTRVGKFELGKTIGEGSFAKVKLARNVDSRDHVAIKILDRNHVLRHNMMEQLKKEISAMKLINHPNVVKIFEVMASKTKIYIVLELVNGGELFDKIATNGKLKEDEARSYFHQLINAVDYCHSRGVYHRDLKPENLLLDSNGVLKVSDFGLSTYAQQEDELLRTACGTPNYVAPEVLKDRGYVGSASDIWSCGVILFVLMAGYLPFDEPNHVALFRRISRADFSFPSWFAPKLKKLLKRILDPNPLTRIKIEELLEDEWFKKGYKPASFTEEEDVNVDDVAAAFNDSKDNLVTERKEKPVSMNAFELISRSQSFNLNSLFEKQTGVVKRETHFTSQHPANEIMSKIEEAAKPLGFNVHKRDYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKNFSSGLQDIVWHADEEK* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1005 484 Gene3D Phosphorylase Kinase; domain 1 53 143 - -
Lan9g1005 484 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 55 480 - -
Lan9g1005 484 Gene3D Transferase(Phosphotransferase) domain 1 144 345 - -
Lan9g1005 484 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524
Lan9g1005 484 SUPERFAMILY Protein kinase-like (PK-like) 61 368 IPR011009 -
Lan9g1005 484 ProSiteProfiles Protein kinase domain profile. 64 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1005 484 CDD CIPK_C 360 473 - -
Lan9g1005 484 Pfam NAF domain 356 416 IPR004041 GO:0007165
Lan9g1005 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Lan9g1005 484 ProSiteProfiles NAF domain profile. 354 378 IPR018451 GO:0007165
Lan9g1005 484 Pfam Protein kinase domain 64 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1005 484 Gene3D Kinase associated domain 1, KA1 353 479 - -
Lan9g1005 484 SMART serkin_6 64 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1005 484 PANTHER - 55 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1005 Lan-Chr9 16996379 17000941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1005 52 481 CBL-interacting serine-threonine protein kinases AT1G01140 73.684 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan9g1005 Pkinase 3.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1005 - - gmx:100794136 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0619 11 5001837 5006460 Lan9g1005 9 16996379 17000941 LSH