Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0980 ATGATGGAAAAGGGACAAAAGTTTGTGAGGTTTAAGGATTGGAGATCAGAATCATCTTTATCTACAGAGCAGAATGACCCTGATAGTAACGAATTTCATAAAGGAGAAGTTAAATTAAATCCTGTTACTGATGGAGCTAACAAAAGCATGGCTTCTAGGAGGAAAGTTCTTGATCCACAAGGGTCATTACTACAGAAATGGAACAAAATATTTGTAATCACATGTTTCTTGGCCATATCTGTGGATCCATTGTTCCTTTACATCCCAGTGATAAATGAACAGAGAAAATGCCTTGATTTGAGTGGAAAACTGCTGAAGATTATTGCTTGTGTTCTTCGCACATTCTTTGATATTTTCTACGTTCTTCGCATCATTTTTAAGTTTCGAACCGGCTTTATTGCCCCTTCTTCTCGTGTATTTGGAAGAGGTGAATTGGTTGATGATCCTGTGGCTATAGCAAAGAAATACTTAAGTTCATATTTCATCATTGATATTCTGTCCATTATTCCACTTCCACAGATGGCCATTTTAGCTGCCATTGCAATACCACAATACTCAGCTCCACATATGGCAAAAATGATGTTGAAGTATATCATAATAGCTCAGTATGTACCAAGATCTCTGAGGATCTATCCTTTATACAAAGAAGTAACAAGGACTAGTGGCATATTGACTGAGACAGCATGGGCTGGAGCTGCTTTTAATCTTTTTCTCTATATACTAGCAAGTCATGTGGTTGGATCTTTCTGGTATATGTTTTCAGTTGAATCAGAGGTTCGATGCTGGCACAGACAATTGAAGAACACTACATTCTCTCATGATTCCTTCATAAGCTGTGGAGTAAAAGACAACCCAACTGTTTTATCACTTCTTAATAGACCTATTTCTTGTCCTCACAAAGATCCCGATGACACCACAGATCCAACATTTTTCAATTTCGGAATATTTATGGAAGCTCTAAAGCCTGGTTTGGTAAACTCAGATACAGATTTTACTGATAAGATCTACTACTCCTTTTGGTGGGGTTTGCGAAGTGTAAGTTCTGTTGGACAAAACCTCCAAACAAGTACTTATTCTGGGGAGATAACCTTCGCTATCTTCATTTCCATCTCTGTATTGGTTTTATTCACATCACTTATTGGAAACATGCAGAAATATCTACAATCTACAACAGTTAGAGTTGAAGAGATGAGAATCAAAAGGAGGGATGCAGAACACTGGATGTCCCACCGGATGCTACCTGACTACTTGAAGGAAAGAGTTAGACGGTATGATCAATACAAATGGCAAAAAAATAGAGGCGTCGAGGAGGAGACATTAATTCGAAATCTCCCGAAAGATTTGAGAAGGGACATTAAGCGTCATCTTTGCTTAGATTTATTGAAAAAAGTGCCAATGTTTGAGAACATGAATAAACAGTTGTTGGATGCAATGTGTGATAGACTGAGGCCAGTCCTTTACACAGAGAAAAGTGACATTATTCGGGAAGGAGATCCAGTTGATGAAATGCTCTTCATTATGCGCGGAATTCTTGCTACTGCGACAACAAATGGTGGAAGAACTGGTTTTTTCAACTCCTTTGTGCTCAAGGCTGGTGATTTCTGTGGAGAAGAGCTTCTAACATGGGCCTTAGATCCCAACACTTCACCAAATCTACCCATTTCAACTAGAACTGTGCAGACTATATCAGAAGTTGAAGCCTTTGCTCTCACGGCTGAAGACTTGAATCTTGTTGCTTCCCAATTTCGGCGCCTTATAAACAGCAAACAGCTTCAACACACTTTCAGGTTCTATTCCCTGCAATGGAGGACATGGGCAGCATGTTTCATACAAGCAACTTGGCGTCGATACTTGAAAAAGAAGGCTAAGAGGTCACTACGTGCAGCCGAAGACAGGCTGCGCGCTTTTGCAAATGCAGATGGGTCATCACCAAGCATTGGTGCTGTCATATATGCATCAAGGTTTTCATCCAATCTGTTACGATCCTTGCGAAGAAGCAAGCGCAATAAAATGCCACATACACGCAAAGTACTACCCTTGCTGCCTCGGAAGCCATCTGAACCAGATTTCACTACTAAAGAGAAATAG 2088 0.3994 MMEKGQKFVRFKDWRSESSLSTEQNDPDSNEFHKGEVKLNPVTDGANKSMASRRKVLDPQGSLLQKWNKIFVITCFLAISVDPLFLYIPVINEQRKCLDLSGKLLKIIACVLRTFFDIFYVLRIIFKFRTGFIAPSSRVFGRGELVDDPVAIAKKYLSSYFIIDILSIIPLPQMAILAAIAIPQYSAPHMAKMMLKYIIIAQYVPRSLRIYPLYKEVTRTSGILTETAWAGAAFNLFLYILASHVVGSFWYMFSVESEVRCWHRQLKNTTFSHDSFISCGVKDNPTVLSLLNRPISCPHKDPDDTTDPTFFNFGIFMEALKPGLVNSDTDFTDKIYYSFWWGLRSVSSVGQNLQTSTYSGEITFAIFISISVLVLFTSLIGNMQKYLQSTTVRVEEMRIKRRDAEHWMSHRMLPDYLKERVRRYDQYKWQKNRGVEEETLIRNLPKDLRRDIKRHLCLDLLKKVPMFENMNKQLLDAMCDRLRPVLYTEKSDIIREGDPVDEMLFIMRGILATATTNGGRTGFFNSFVLKAGDFCGEELLTWALDPNTSPNLPISTRTVQTISEVEAFALTAEDLNLVASQFRRLINSKQLQHTFRFYSLQWRTWAACFIQATWRRYLKKKAKRSLRAAEDRLRAFANADGSSPSIGAVIYASRFSSNLLRSLRRSKRNKMPHTRKVLPLLPRKPSEPDFTTKEK* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0980 695 MobiDBLite consensus disorder prediction 16 47 - -
Lan9g0980 695 Gene3D Jelly Rolls 464 584 IPR014710 -
Lan9g0980 695 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 7 693 - -
Lan9g0980 695 Gene3D Helix hairpin bin 393 457 - -
Lan9g0980 695 SMART cnmp_10 466 597 IPR000595 -
Lan9g0980 695 ProSiteProfiles cAMP/cGMP binding motif profile. 466 549 IPR000595 -
Lan9g0980 695 Gene3D - 70 390 - -
Lan9g0980 695 SUPERFAMILY cAMP-binding domain-like 395 582 IPR018490 -
Lan9g0980 695 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 7 693 - -
Lan9g0980 695 Pfam Ion transport protein 67 394 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lan9g0980 695 SUPERFAMILY Voltage-gated potassium channels 58 388 - -
Lan9g0980 695 ProSiteProfiles IQ motif profile. 603 632 IPR000048 GO:0005515
Lan9g0980 695 Coils Coil 619 639 - -
Lan9g0980 695 MobiDBLite consensus disorder prediction 668 695 - -
Lan9g0980 695 CDD CAP_ED 466 598 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0980 Lan-Chr9 16562167 16567047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0980 44 694 Ion Channels AT1G01340 63.030 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0980 K05391 - gmx:100795201 973.77