Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0974 ATGGAAGGTAACTTGAAGTTGGAACAAGTTGGTCTCATAAGTGACCTAATGCAAGGGGAGGAGCTAACAAAGAAGTTACATAACCTTATGTTCTCATCATCATCATCAACATCTCATGAAACCAAATTAGTTTTAATTGATAAAATCCTTGTGTCTTATGAGAAGGCACTCAAAAAGCTGAAGTGGGAGGCTAATATGGGAGAGGAAGATACTAAGATCACCATTTCCAAGATGATGGATTCTCCATGTTCCTTTACAAATGAGAGCCCTAGAGGAGAGGTTTTGGACCAAGAGATTAAGCACAAAAATGTCTCCAAGAAAAGAAAGACCATGGATAGTTGGACAAAACAAATGAAGGTTTGCTCAGGAACAGTGCTTGATGGGTCTCTAGGTGATGGTTATAACTGGAGAAAATATGGACAGAAGGATATTCTGGGAGCAAAGTTTCCAAGGGGATATTACAGATGTACACATAGACATGCACAAGGGTGTCTAGCCACAAAGCAAGTGCAAAAGTCAGATGAAGAATCAACATATGAGATAACCTACAAAGGAAGACACACATGCATCCAAGCTAGTCATGCAAAAAAGGCATTCCCATCAAAATCAAAGACTTGCATGTCAGAAAATAAACACCACAACCACCAAAAGAATAAAGCACAAGAAGAGAAAATAGAACAACCTCATGAGACAACTTTCACTTTTGGCCCAGAGTTTGAAGTTAAAATAGACTTGGAAACCAAGGAAGATATTTTCCCATCATTTTTCTTTTCTTCTCCATCAATAGGGTTAGAAACAATGATTGAAAACCATTTCACAGAAACATTTTCTCCTGCATTCTTATCACCATCCACTTCAGAATCAAACATTTTCTGTTTATCACCATGCAACTTTGGAAGCAGTGGACTAGGCCTGAGTGTGCAAACATCAGAATCAGATATCACTGATGTAGTGTCAGCCACAACTTCAGTTAACAATTCACCAATAGCAAACTTGGATGATTTGGATCTCTTCTTTGATAATGTGGATTTTGACACAGATTTCCCTATCAACACTCCTGAATATTTCACTTTATAA 1077 0.3788 MEGNLKLEQVGLISDLMQGEELTKKLHNLMFSSSSSTSHETKLVLIDKILVSYEKALKKLKWEANMGEEDTKITISKMMDSPCSFTNESPRGEVLDQEIKHKNVSKKRKTMDSWTKQMKVCSGTVLDGSLGDGYNWRKYGQKDILGAKFPRGYYRCTHRHAQGCLATKQVQKSDEESTYEITYKGRHTCIQASHAKKAFPSKSKTCMSENKHHNHQKNKAQEEKIEQPHETTFTFGPEFEVKIDLETKEDIFPSFFFSSPSIGLETMIENHFTETFSPAFLSPSTSESNIFCLSPCNFGSSGLGLSVQTSESDITDVVSATTSVNNSPIANLDDLDLFFDNVDFDTDFPINTPEYFTL* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0974 358 MobiDBLite consensus disorder prediction 206 224 - -
Lan9g0974 358 SMART WRKY_cls 130 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan9g0974 358 Gene3D WRKY domain 117 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan9g0974 358 ProSiteProfiles WRKY domain profile. 130 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan9g0974 358 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 351 IPR044810 GO:0003700
Lan9g0974 358 SUPERFAMILY WRKY DNA-binding domain 129 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan9g0974 358 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 351 - -
Lan9g0974 358 Pfam WRKY DNA -binding domain 132 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan9g0974 358 MobiDBLite consensus disorder prediction 205 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0974 Lan-Chr9 16398543 16413361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0974 35 200 WRKY Transcription Factor Family AT5G24110 43.713 2.14e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan9g0974 WRKY 7.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0974 - - aprc:113849885 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0662 11 5539651 5542711 Lan9g0974 9 16398543 16413361 LSH