Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0965 ATGCACACCTTCTCCTCCTTCTTCATCTTCCTTTTACACCTAATCACCTCACACTCCCTCCCTCATCACCATAGAATCCTACACCAACCCTTCTTCCCACAGGACACCCTCCCTCCAACCCAACCCCCACACCCTCCACCCTCTTCCCCTTCCCCCTCCCCTACCCTTAAACCACAAAACCCAAAATACCCCTTCTCCTCCACACCCACAACAACAAACTCTTCACCATTCTTCCCAATATACCCTTCTCCCCCTCCCCCACCCTCTCCTTCTTCCTTTGCTTCCTTCCCAGCCAACATCTCCTCCATCATCTTTCCCCACTCACCCAAATCCAAATCCTCCTCCTCCAAACTCGTTGCTGCCGCCGTTACCTCCGTCGTCGCTGCTCTCCTCGTGGCGGCGATATCTGCCTTTGTTTACTGTCGCCGGCGAAGGAGAAATGGTTTTAATGATGACAAGACTCTTAGATCCGACTCAAGTATTCGTCTTTTCCCTCGCTGTGAGAACAACGTTGAAGATGGTGGTGTTGGTAACCGTAAGATTCGACATGGTTCTTCTATTAGTTCTGAGTTTCTCTACCTTGGCACTGTTGTTAATTCGCGTGGAATCGAAGATGTTAGTGATTCTCGTGGTAATGTATGTTCCGGTGCTGGTTTAATAAACCCTCGGAAAATGGACTCGCCGGAGCTGCAGCCGCTCCCGCCGTTAGCACGGCAAGGTTCGGAGCTTCGACGAGCGTGTGAAGAGGTTGGTTCGACGGCGGAGGAGGAGGATGAGGAGTTCTACTCGCCGAAAGGGTCTATTGGTGGCGGTGGAAGCTCGAATGGAACTGGATCGGGTTCTAGAAGAGTGTTATCGGAAATGGCTGCTGAGAATTTCGTTGGTAGAAGTAGCGATTCGAGTTCGAGTTCCTTCTCTTCTTCCTCTTTTGCTTCGCCGGATCGATCTCATTCGATTAGCCTCTCGCCGCCGGTGAGCATAAGCCCTAGAAAGTCGCCGGAAAATGAAACTCCGCCGGCGCTACCACCAACTGAAACACTCGCCGTCGATGGTAGAAGTTTTTTGTCTTCATCTTCACTCTCATCGCCACGTGTTCAGTCACGTGCGATGTCCCCAGTTTACAATCAGCACGTGCGAGAATCTTGTTCTTCAATGTCTTCAACACCGGAACGAGAGTGTCAAACTCAATCTCCGTTACTGTCACCGCTTTCTCTGTCACCGAACAGGGTACTGGAGAAAAACCCAGATGTAAAGGTTCAATCTTGTTGCGTATCGCCGAACAAAAACGACGGCGTTTCATCGCCTCCGAGATTATCGAATGGGAGTGGAAAATCTGTGTCTTCATCTTCAGCTTTTTCTATTCCGTCACAGGGGGAAGTTGAAAATCAGAATCATAATCAGATTTTGAATCACTCTCCAACAATATCAGATGTTTCAGATCGTTATAGGCATTCTCCACTTTCATCATTACCGTTATCACCATCGTTGCTTTCATCGCCAGAAACAGAACTGAACTCGAACCCAAACCCGAACCCGAACCCGAGCCATGCTTTGAATCAATCACAGAGAAAGCATTGGGAGATTCCAGACCTATTGACACCACCCATTGTTGGATCAGTTACAGTTGAAAATGTTCCTACAAGGAAACAATGGGAGATTCCGGTTTTGCCAACACTTGTTGTGTCATCTATTAGAGTTTCTGCTCCTGCTCCTCCGGCACCGCCTCCACTGCCACCTCCACCTCCACTTCCTGTGTCGCGACAGCGAAAACAATGGGAGGTGCCTGCTGCTTCTCCCTCGACACCTGTTGGACAACTGATTTCGAGGCCACCTGAACTAATGCCACCTTCGAGGCCTTTTGTGTTGCAAACCCCAACAACAAAGATTTCTCCTGCTGAGTTGCCACAGAGTTTGGGATTGATTGAAGAGAGTCCTGATGAGGCATCTAAGCCAAAGTTGAAGCCTTTGCATTGGGATAAAGTCAGGGCCAGCTCTGGTCGTGAAACGGTTTGGGATCACTTGGGGTCCAGCTCTTTTAAGTTGAACGAGGAGATGATTGAAACTTTGTTTGTAGTGAACACACCAAACCCAAAACCTAAGGATAATGCCTCACACTCGGTTCTTACCCCTCCAAGTCAGGAGGACAGGGTACTGGATCCTAAGAAGTCCCAAAATATTGCTATCTCGCTAAGAGCGCTTAATGTGACTATAGAAGAAGTATGTGAAGCACTGTTAGAAGGTGCTACTGATACACTTGGAGCAGAACTACTTGAAAGCTTGCTAAAAATGGCACCAAACAAGGAAGAAGAACGTAAATTGAAGGAACATAAAGATGACTCGCCAGCCAAGCTTGGTCCTGCTGAGAAATTTTTAAAGGCAGTGCTTGATGTACCTTTCGCATTTAAAAGGGTGGAAGCAATGCTTTATGTAGCCAATTTTGAGTCAGAAGTGGAGTATCTTAGAAAATCCTTTCAAACTCTGGAGGTTGCCTGTGAAGAGCTGCGAAACAGTAGAATGTTCTTGAAGCTTCTAGAGGCTGTGCTTAAAACTGGGAACCGCATGAACGTGGGGACAAACCGTGGTGATGCACATGCCTTCAAGCTTGATACACTTCTCAAGCTGATTGATGTCAAAGGTGCAGACGGTAAAACAACCCTACTGCATTTCGTGGTACAGGAAATTATTAGAACTGAAGGTGCCCGCCTCTCTGAAACTAATCAAATTCCAAGCACAACATCGAGTGATGATGCCAAGTGTAGTAGGCTTGGTCTACAAGTAGTCTCTAGTCTATGTTCGGATCTGGGAAATGTGAAGATGGCCGCTGCTATGGATTCTGAAGTTCTCAGCAAGGAAGTCTCTAAACTTTCCAACGGAATTGCACATATCGCAGAGGTTGTGCAATTAATTGAAACGGCAGGGTCAAATGAAAGCAAACAGAAGTTTACATTTACAGAATCAATGCACAAATTCATGAGAATGGCTGAGGAGGAGATTGTAAGAATTCAAGCCCAAGAAAGTGTTGCTTTATCCGTTGTGAAGGAGATTACAGAATACTTCCACGGTAACTTGTCCAAGGAAGAAGCACATCCATTTAGAATCTTCATGGTAGTAAGAGACTTCTTAACAGTTCTTGACAAGGTATGTAAAGAAGTTGGTATGGTAAATGAGAGAACCATGGTTAGTTCTGCGAGTAGATTCCCGGTTCCAGTGAACCCTTTGCTTCCACAACCCCTTAACCCCATGCTCCCGCAACCCCTTCCTGGGCTATACGGAAATCGACAGTATAGCTCTTCAGATGATGATAGTCCATCTCCTTAG 3318 0.4699 MHTFSSFFIFLLHLITSHSLPHHHRILHQPFFPQDTLPPTQPPHPPPSSPSPSPTLKPQNPKYPFSSTPTTTNSSPFFPIYPSPPPPPSPSSFASFPANISSIIFPHSPKSKSSSSKLVAAAVTSVVAALLVAAISAFVYCRRRRRNGFNDDKTLRSDSSIRLFPRCENNVEDGGVGNRKIRHGSSISSEFLYLGTVVNSRGIEDVSDSRGNVCSGAGLINPRKMDSPELQPLPPLARQGSELRRACEEVGSTAEEEDEEFYSPKGSIGGGGSSNGTGSGSRRVLSEMAAENFVGRSSDSSSSSFSSSSFASPDRSHSISLSPPVSISPRKSPENETPPALPPTETLAVDGRSFLSSSSLSSPRVQSRAMSPVYNQHVRESCSSMSSTPERECQTQSPLLSPLSLSPNRVLEKNPDVKVQSCCVSPNKNDGVSSPPRLSNGSGKSVSSSSAFSIPSQGEVENQNHNQILNHSPTISDVSDRYRHSPLSSLPLSPSLLSSPETELNSNPNPNPNPSHALNQSQRKHWEIPDLLTPPIVGSVTVENVPTRKQWEIPVLPTLVVSSIRVSAPAPPAPPPLPPPPPLPVSRQRKQWEVPAASPSTPVGQLISRPPELMPPSRPFVLQTPTTKISPAELPQSLGLIEESPDEASKPKLKPLHWDKVRASSGRETVWDHLGSSSFKLNEEMIETLFVVNTPNPKPKDNASHSVLTPPSQEDRVLDPKKSQNIAISLRALNVTIEEVCEALLEGATDTLGAELLESLLKMAPNKEEERKLKEHKDDSPAKLGPAEKFLKAVLDVPFAFKRVEAMLYVANFESEVEYLRKSFQTLEVACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLIDVKGADGKTTLLHFVVQEIIRTEGARLSETNQIPSTTSSDDAKCSRLGLQVVSSLCSDLGNVKMAAAMDSEVLSKEVSKLSNGIAHIAEVVQLIETAGSNESKQKFTFTESMHKFMRMAEEEIVRIQAQESVALSVVKEITEYFHGNLSKEEAHPFRIFMVVRDFLTVLDKVCKEVGMVNERTMVSSASRFPVPVNPLLPQPLNPMLPQPLPGLYGNRQYSSSDDDSPSP* 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0965 1105 MobiDBLite consensus disorder prediction 420 521 - -
Lan9g0965 1105 MobiDBLite consensus disorder prediction 31 71 - -
Lan9g0965 1105 PANTHER FORMIN-RELATED 6 1105 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lan9g0965 1105 Pfam Formin Homology 2 Domain 646 1044 IPR015425 -
Lan9g0965 1105 MobiDBLite consensus disorder prediction 568 587 - -
Lan9g0965 1105 MobiDBLite consensus disorder prediction 294 333 - -
Lan9g0965 1105 MobiDBLite consensus disorder prediction 695 711 - -
Lan9g0965 1105 PANTHER FORMIN-LIKE PROTEIN 1 6 1105 - -
Lan9g0965 1105 SMART it6_source 643 1059 IPR015425 -
Lan9g0965 1105 MobiDBLite consensus disorder prediction 350 408 - -
Lan9g0965 1105 MobiDBLite consensus disorder prediction 568 586 - -
Lan9g0965 1105 MobiDBLite consensus disorder prediction 294 521 - -
Lan9g0965 1105 MobiDBLite consensus disorder prediction 35 59 - -
Lan9g0965 1105 Gene3D Formin, FH2 domain 638 1054 IPR042201 -
Lan9g0965 1105 MobiDBLite consensus disorder prediction 268 282 - -
Lan9g0965 1105 SUPERFAMILY Formin homology 2 domain (FH2 domain) 571 1055 - -
Lan9g0965 1105 MobiDBLite consensus disorder prediction 218 282 - -
Lan9g0965 1105 MobiDBLite consensus disorder prediction 695 719 - -
Lan9g0965 1105 ProSiteProfiles Formin homology-2 (FH2) domain profile. 643 1070 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0965 Lan-Chr9 16209437 16213926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0965 601 1094 FH2 protein (formin) Gene Family AT3G25500 72.345 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0965 - - var:108322602 1149.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0668 11 5635877 5642560 Lan9g0965 9 16209437 16213926 LSH
Lan9g0965 9 16209437 16213926 Lan2g0751 2 15890596 15894801 LSH