LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan9g0962	ATGAGCACTCAGTCACAACAACAAAAACAAAAACAAAGCCAATACAACAAACAAGAACTCCAAGAAGATGATGAAGCAGAAGAAAATAGGTTGTTGCATTCCAAATGTGAGGCAATACCATTATCCTCACCACACTCATTCTCACACAATGCAGATACAGAGGAAGACGCTGAGTATGCAGCCAAAGACAAGGTCCATATATTTGACTTAGAGACTGCCACAGGCGGCGCCATCGGTTCCACGGTGGTGCCACCCTTCTCATGGAAGAAGCTATGGTTGTTCACAGGGCCAGGGTTGCTTATGAGCATTGCATTTTTAGACCCGGGGAACTTGGAAGGGGATTTACAGGCTGGTGCAGTTGCAGGGTACTCTCTGAAGAAGAACTTCATTTTGATGCTTCTTGTAGGTATTTTGATCCCAAGAGTTAGCTCGAAAACGCTTCGCCAGGCAGTGGAAATTGTAGGTTGTGTTATAACCCCACATAATGTTTTTCTCCATTCAGCATTGGTACAATCAAGGGACATTGATATCCATAACAAAAGCCAGGTTCAAGAGGTTATCAACTACTACTCAATTGAGTCCTCAGTTGCACTTCTAATCACCTTGGTGATCAACCTATTTGTGATAACTGTTTTCGCGCGAGTGTTTTACGGCACAGAACAGGCCAAGGACATAGGACTAGTAAATGCAGGGCAATATCTTGAGGAGAAATATGGAGGAGGGTTGTTTCCAATTCTCTATATATGGGGTATTGGTTTGTTAGCAGCAGGACAAAGTAGCACAATCACTGGCACATATGCAGGACAGTTTATAACAGAAGGTTTTCTGAAGCTCAACATAAAGAAGTGGTTAAGGGCTTTGATTACTAGAAGTTGTGCGATTGTTCCAACTATGATTGTAGCAATTGTTTTTAATACATCAGAAGGTTCATTAGATACCTTGAATGAATGGCTTAATGTGCTACAAGCAATACAGATTCCTTTTGCACTTATCCCCCTTCTTACTTTGGTATCCAAAGAGGAAGTCATGGGAACCTTTAGAATAGGACCTATTGTTGAGGTTAGTTATCCATATAACATTTTAGTTAACTTTTATCCCAATCTTAATGCCACTTTTATTAGTTAG	1125	0.4098	MSTQSQQQKQKQSQYNKQELQEDDEAEENRLLHSKCEAIPLSSPHSFSHNADTEEDAEYAAKDKVHIFDLETATGGAIGSTVVPPFSWKKLWLFTGPGLLMSIAFLDPGNLEGDLQAGAVAGYSLKKNFILMLLVGILIPRVSSKTLRQAVEIVGCVITPHNVFLHSALVQSRDIDIHNKSQVQEVINYYSIESSVALLITLVINLFVITVFARVFYGTEQAKDIGLVNAGQYLEEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLKLNIKKWLRALITRSCAIVPTMIVAIVFNTSEGSLDTLNEWLNVLQAIQIPFALIPLLTLVSKEEVMGTFRIGPIVEVSYPYNILVNFYPNLNATFIS*	375

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan9g0962	374	MobiDBLite	consensus disorder prediction	16	31	-	-
	Lan9g0962	374	PRINTS	Natural resistance-associated macrophage protein signature	150	173	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan9g0962	374	PRINTS	Natural resistance-associated macrophage protein signature	257	276	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan9g0962	374	PRINTS	Natural resistance-associated macrophage protein signature	285	302	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan9g0962	374	PRINTS	Natural resistance-associated macrophage protein signature	319	338	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan9g0962	374	PANTHER	SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER	47	126	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan9g0962	374	PANTHER	SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER	133	361	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan9g0962	374	MobiDBLite	consensus disorder prediction	1	31	-	-
	Lan9g0962	374	MobiDBLite	consensus disorder prediction	1	15	-	-
	Lan9g0962	374	Pfam	Natural resistance-associated macrophage protein	134	349	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan9g0962	374	PANTHER	METAL TRANSPORTER NRAMP3 PROTEIN	133	361	-	-
	Lan9g0962	374	PANTHER	METAL TRANSPORTER NRAMP3 PROTEIN	47	126	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan9g0962	Lan-Chr9	16145482	16147037	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan9g0962	133	353	Inorganic Solute Cotransporters	AT1G47240	79.186	2.12e-124	367

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan9g0962	K21398		-	lang:109356302	723.005

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan9g0962	9	16145482	16147037	Lan2g0753	2	15938340	15942505	LSH