Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0952 ATGGCCTCTCGTGAAGGGAGGCGGCGCCATCATGATCTTGTGCCTCTTTCCGTGTTGCTTAGCAGAGAGATGAAGAATGAGAAGATGGAGAAGCCCACTGTGAGGTATGGATATGCTGCACAGTCTAAGAAAGGGGAGGATTACTTTCTAATTAAGACTGATTGTTACCGAGTGCCTGGGAATAATTCTTCATCGTTCTCTGTATTCGCGATCTTTGATGGGCATAATGGAGATGCTGCAGCCATTTTTACTCGGGAGAATTTGTTAAATCATGTGTTGGGTGCTCTGCCTCGAGGGCTTGGATCAGAGGAGTGGCTGCAAGCTTTACCTCGGGCATTGGTTGCTGGGTTTGTGAAGACTGACAAGGAATTTCAGAGAAGAGGAGAAACTTCTGGAACCACAGCTACATTTGTTATAGTGGATAGGTGGACCGTGACAGTTGCGTGTGTTGGAGATTCCCGTTGTATATTAGATGCCCAGGGCGGTGCTGTTACCAACTTAACTGTTGATCACAGGCTTGAGGAGAACATTGAAGAGAGGGAACGTGTTACTGCAAGTGGAGGCGAAGTTGGGAGGCTTAGCATTGTTGGTGGTGCTGAGATTGGTCCCCTTCGATGCTGGCCCGGGGGTCTATGCCTTTCTAGATCTATAGGAGACATGGATGTCGGAGAGTTTATAGTTCCAATACCATATGTTAAACAAGTGAAGCTATCAAAGGCTGGTGGGAGGCTTATAATTGCTTCTGATGGCATCTGGGATGCTCTATCATCCGAAATGGCTGCAAAATCTTGTCATGGTTTGCCTGCTGAACTTGCTGCTAAGCAGGTTGTAAAGGAAGCACTACGGACAAGAGGGTTAAAGGACGATACAACTTGCATTGTAGTTGACATAATCCCACCTGATAATGAATTGCCACCACCAACCCCTCCTAAAAAGCAAAACATATTCAGATCACTTTTGTTCAGGAAGAGATCCAATGATTCTTCTGGTAAGCTGTCGAAGAAGCTTTCAGCTATAAATATAGTCGAGGAATTATTTGAAGAAGGATCGGCTATGCTTGCTGAAAGATTAGGAAATGATGAGAACTCAGGGCAATCAACATCTGGCATTTTCATATGTGCTGTATGCCAAGTTGACCTTGGTTCAAGTGAGGGTATATCTGTCCATGCAGGTTCTATATTTTCCACTAGTTCAAAGCCTTGGCAAGGTCCTTTTCTATGTGCTGATTGTCGTAATAAGAAGGATGCTATGGAAGGAAAACGTCCTAGTGGAGTTAAAGTGTCATAG 1287 0.4491 MASREGRRRHHDLVPLSVLLSREMKNEKMEKPTVRYGYAAQSKKGEDYFLIKTDCYRVPGNNSSSFSVFAIFDGHNGDAAAIFTRENLLNHVLGALPRGLGSEEWLQALPRALVAGFVKTDKEFQRRGETSGTTATFVIVDRWTVTVACVGDSRCILDAQGGAVTNLTVDHRLEENIEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSKAGGRLIIASDGIWDALSSEMAAKSCHGLPAELAAKQVVKEALRTRGLKDDTTCIVVDIIPPDNELPPPTPPKKQNIFRSLLFRKRSNDSSGKLSKKLSAINIVEELFEEGSAMLAERLGNDENSGQSTSGIFICAVCQVDLGSSEGISVHAGSIFSTSSKPWQGPFLCADCRNKKDAMEGKRPSGVKVS* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0952 428 Pfam Protein phosphatase 2C 61 282 IPR001932 -
Lan9g0952 428 SMART PP2C_4 25 295 IPR001932 -
Lan9g0952 428 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Lan9g0952 428 CDD PP2Cc 36 297 IPR001932 -
Lan9g0952 428 SUPERFAMILY PP2C-like 34 297 IPR036457 -
Lan9g0952 428 Gene3D - 17 298 IPR036457 -
Lan9g0952 428 PANTHER ALPHABET, ISOFORM E-RELATED 2 427 - -
Lan9g0952 428 SMART PP2C_SIG_2 30 297 IPR001932 -
Lan9g0952 428 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 2 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0952 Lan-Chr9 16034817 16038842 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0952 1 427 PP2C-type Phosphatase Gene Family AT1G68410 79.817 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0952 - - gmx:100779571 754.592