Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0951 ATGGAACCCATATTTTGGTTTCTCATAAAGCTCTCACCTTTATTCTTTCTATGTTCAAATGCAGAATCCAAATGCACACAAGGTTGCCCAATAGCACTAGCTTCATACTACATGTTGTCAGGTTCAAACTTAACATATATTTCACAAATAATGTCATCACATGTTCTTCATTCACCTGAAGACATAGTTAGTTACAACAAAGACAAAGTTCAACCTTTCACTAGGGTCAATGTTCCATTCCCATGTGATTGCATAAAAGGTGAGTTTTTGGGTCATATGTTTCAGTATGTTGTTCAGACAGGGGATACTTATGAAACTGTTGCTGGAACAAACTATGCAAATTTGACCAATGTTGAGTGGTTGAGGAGGTTCAATACATACCTTCCTGATAATATTTCTAGTACTGGAATGCTTAATGTCACTGTTAATTGTTCTTGTGGGAATAGTGATGTATCAGATTATGAGTTGTTCATAACATACCCACTTAGGCCTGGGGAAACTTTGGGTTCAGTGGCTAAGAGTGTAAAACTTGATTCTGGGTTGCTGCAGAGGTACAATCCTAGTGTGAATTTCAACCAAGGGAGTGGTCTGGTTTATATTCCAGGAAAAGATCAAAATGGCAGCTATGTGTTTTTGAGTTCAAGTTCAGGAGGTCTTGCTGGTGGGGCTATTGCTGGCATTGCTGTTGGAGTAGTGGCTGGTATTCTGTTATTGGTAGTTTGTATATATGTTGGATGTTTCCGGAAGAAGAAGATACAGAAGGAGGAAGTTGTCAGACCAGATTCCAAATCACACTCTGTTCCAGATGGAATGGACGAAATCAGTCTTGTTGCTGCATATGAAACTTCAAGGCCTCGTGGTTCTGCTGCCATCGCAGGCATATCAATGGACAAATCAGTGGAGTTCTCTTATGAAGAACTCGCAAGTGCGACAAATAACTTTAGCGTGGCTAATAAAATTGGTCAAGGTGGTTTTGCAGTTGTCTACTACGCGGAGCTGAGAGGAGAAAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAATTTCTTGCTGAATTGAATGTCCTGACACATGTTCATCATCTTAACCTGGTGCGGTTGATCGGATACAGTATAAAGGGCTCTCTTTGCCTTGTCTATGAATTCATTGAGAATGGAAACTTGAGTCAACATCTACATGGTTCAGGAAGAGAACCACTGCCATGGACTATCAGGGTGCAAATTGCTTTGGATTCTGCCAGAGGTCTTGAATATATTCATGAGCATACAATGCCTATATATATTCATCGTGACATAAAGTCGGCGAATATATTAATAGACAAAAACTTTCGGGGGAAGGTTGCTGATTTTGGTTTGGCAAAACTGGCGGAAGTTGGAAGTTCATTGCGTCCTACTGTTCGTCTTGTTGGAACATTTGGATACATGCCTCCAGAGTATGCTCAATATGGAGATGTATCTCCCAAAGTAGATGTATATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCAGCTAAGGAAGCTATCATCCAATCTATTGTTGACTCAAAGGGCCTTGTACATTGGTTCAAAGAAGTTCTTAGTCAGCCTCATTCGACCGAAGATCTTTGCAAATTAGTGGATCCAAAGCTAGGGGACAACTACCCTATTGATTCTGTTCTCAAGCTTGCTCAACTAGCCAAAGCATGTACACAACACAATCCCCAACTGCGTCCAAGTATGAGATCCATTGTGGTGGCTCTTATGACACTATCTTCAACTACTGATGATTGGGATGTTGGTTCTTTCTATGAAAATCAAAATCTTGTGAATCTTATGTCAGGAAAATAG 1833 0.4004 MEPIFWFLIKLSPLFFLCSNAESKCTQGCPIALASYYMLSGSNLTYISQIMSSHVLHSPEDIVSYNKDKVQPFTRVNVPFPCDCIKGEFLGHMFQYVVQTGDTYETVAGTNYANLTNVEWLRRFNTYLPDNISSTGMLNVTVNCSCGNSDVSDYELFITYPLRPGETLGSVAKSVKLDSGLLQRYNPSVNFNQGSGLVYIPGKDQNGSYVFLSSSSGGLAGGAIAGIAVGVVAGILLLVVCIYVGCFRKKKIQKEEVVRPDSKSHSVPDGMDEISLVAAYETSRPRGSAAIAGISMDKSVEFSYEELASATNNFSVANKIGQGGFAVVYYAELRGEKAAIKKMDMQASKEFLAELNVLTHVHHLNLVRLIGYSIKGSLCLVYEFIENGNLSQHLHGSGREPLPWTIRVQIALDSARGLEYIHEHTMPIYIHRDIKSANILIDKNFRGKVADFGLAKLAEVGSSLRPTVRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIIQSIVDSKGLVHWFKEVLSQPHSTEDLCKLVDPKLGDNYPIDSVLKLAQLAKACTQHNPQLRPSMRSIVVALMTLSSTTDDWDVGSFYENQNLVNLMSGK* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0951 610 SUPERFAMILY Protein kinase-like (PK-like) 296 582 IPR011009 -
Lan9g0951 610 SMART serkin_6 314 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0951 610 Pfam LysM domain 96 138 IPR018392 -
Lan9g0951 610 Gene3D Phosphorylase Kinase; domain 1 293 384 - -
Lan9g0951 610 Pfam Protein tyrosine and serine/threonine kinase 316 581 IPR001245 GO:0004672|GO:0006468
Lan9g0951 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Lan9g0951 610 PANTHER LYSM RECEPTOR KINASE 1B 11 610 - -
Lan9g0951 610 ProSiteProfiles Protein kinase domain profile. 314 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0951 610 Gene3D Transferase(Phosphotransferase) domain 1 385 601 - -
Lan9g0951 610 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Lan9g0951 610 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 11 610 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0951 Lan-Chr9 16012509 16022281 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0951 11 610 Receptor kinase-like Gene Family AT3G21630 57.325 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lan9g0951 PK_Tyr_Ser-Thr 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0951 - K13429 gmx:100777781 862.833