Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0937 ATGGTCACCGATGGCCACAAGCACCGTCGTTCCATCTCTCCGGGAAACTCCGATAAATCCTCTAAGCGCCACAAGCACCGCCACCATCATCGCCGTCACCACCGCCACCGCCACGGTAGCAGAAAGCGCGACGAAGAAAACGAATATGATTGTGAAACTGTTCCTGCGGTTCCTTCACCGATTCCCGCTACCAATTCTGCTCAAAATCGTCATATGCCGGTTGATGATGCCGAGGAGGGGGAGATTCTCGAAGTTGAAGATGGCGATGTTAGGAAAAAACAGATTGCATCTTATTCGGAGGCTGATAAGGCGAATTCGGGGCTTCATGCTAACAATTCGAAAGTTAGAAGTGAGGGTATTAGTGATGAAATTATTTTTAGCCCGGCATTTGATGCAGAAGATAGGACATGCCGTCAGAATAACATTGGCCATAGAATGCATGAAGATGAGGGTTCTCCTAATCTTTTAAGTGCTAGTCCTAAATATGGAAAGGATGCTAGAGGTAGTACAAATAATATGGGAAATGGCCATTTGAATCCTAAGTCTCCTAAAAGAGAAAAGAGGCGTAGTGGAGAAATTGGAAGTTATAAAGGAAATGAGATAGTAAAAGGTGAGTATGATGATGATCTGGAGGTTGATGGTGGGAAAGTAAATTATCACAGGAATTCATCCTCGAAAAGTGGAGAAAAATATAGGTCAGGACATTTGCCTTCTCGTGATAGATATAGAAGTCGATCAAGATCAAATGATCATGCTAGGGACAGGTCTCGTTCTCGTAGTATTGTAGAAGAACATAGAAGGCACTCTGGTGAACAAGGGGACTATCCATATGCTGGTCGATCGAAGTCTGACCGTGAACATGATGATGAAAGAATGGTGGTAAGGAGAAGTGAAATTTATCGCAGTCGGGAGGCCCGAGATACGAGTATGGACATGGGTGTTGACAGGGACTTGCAGAGGGAAAAGAAACGAGAGAATAGCAGGAATAGGGAGGTAGACCGGGTCTGTAGAAGGGAAAAAGAACATGGAAGTAGCCATGTGAGGCATAGAAGGGATGCAGAAAGAGGTAAGAGCAGGGAAAAAGAGGATGATAGTGGTAGGAGAAGAGAAAATGAACGAGATAGAAGCCGGGAGACAGTGTATGAAAGGGATATGAGAAGGGAGAAGCAAAGAGATAGAAGTAGGGACAGAACAAGGGGTGATGGAAGAGATAGAGTCTGGGAGAGTCGGCAGAATGACAAGAATCAGGAAAGGGATAAAAGTAAGGAAACAGAGAAGGAGAAAAAAGAGGATAGAAATAGGCATAAGTATAAAGACATTGTGAATGGTAAGGGGGAGCATCTGCATTGCAATGAGAGTTATGACAGTCGAGATAGATATAGAAGGCATTCAAGACATGAAGAAACAGAATGGCACCGGGAAAGAAAATTAAATTCCGAGCCTGTAAAGGTTTATAACAGTATGGACAGTACCTTGGTTGATGATGAAAACAAACTCGACAGAGGAGAGGATGAAGATGACTTAGATGAGAAGGTTACATTGCAATTACCTGATCAAGAAGAAGAAGATCTCAACAGGATTAAAGAGGAGAGTAGAAGGAGAAGAGAAGCAATCTTAGAGAAATACAAGAAGCAGCAGCAGCAGCAAGAAGAACAAACTACTGAAATTGAAGGAAAAGACAAGCAAACTGAAGAGACTCCTCCTGCCATTCCTAAAGCTCTTTATGGAAAGAACAACGATGTTGATGGTGCAGAAGTATCTTTTTCTGTTGGTAAATCTCCTGCAAAAAATGGGAATGTTGCTTCTGGTAAGATCTCAGTTGCTGGGGGACTTAGAGAGGGTACTCCTAAGAGTGAGAGATCAGATGACATGTTTTGTGATGATATATTTGGCGAGACACCAACTGGAGTTCGAAAATTGGGAAAAGGAGATGGTTTACAGATTGAGAGGGGTGGCTTGCATGACAACTGGGATGATGCAGAGGGGTATTACAGTTATCGTTTTGGTGAAATACTTGATGGCCGATATGAAGTCACCGCTGCTCATGGAATGGGTGTCTTTTCAACAGTTGTTCGAGCAAAGAATCTTAAGGATGGTAATGGAGAGCCCGAAGAAGTAGCTATAAAAATTATTCGTAGTAATGACACTATGTACAAGGCTGGTATGGATGAGTCAGTCATATTGAAGAAACTAGTAGGTGCTGATCTAGATGATAAGCGTCATTGTGTTCGTTTTCTTTCAAGTTTTAAGTACAGGAATCACCTCTGTTTAGTTTTTGAATCTCTTCATATGAATATGCGTGAGGTCTTAAAGAAGTTTGGTCGCAATATTGGACTTAAGCTAACTGCAGTGAGAACGTATGCAAAACAGCTTTTTATTGCACTGAAGCATCTTCGGAACTGTGGTGTTCTCCATTGTGATATAAAACCAGATAATATGTTGGTAAATGAGGCCAAAAATGTTTTGAAGCTGTGTGACTTTGGTAATGCCATGTTTGCTGGTAAAAATGAAGTTACCCCATATCTTGTTAGTCGCTTTTATCGTGCCCCTGAAATAATACTTGGCTTGACCTATGATCATCCATTGGATATGTGGTCTGTAGGTTGTTGCTTGTATGAACTCTATAGTGGGAAAGTTCTTTTTCCAGGCTCCACAAACAATGACATGCTACGACTTCATATGGAATTGAAGGGCCCTTTTCCAAAGAAGATGCTACGAAAGGGAGCATTTACCGAACAACATTTTGATCTGGACTTGAATTTTTTTGCTTCAGAGGAGGACCCCGTGACAAAAAAGACGATAAAACGGATGATTGTCAACATAAAGCCAAAAGATATTGGAACAATCATCACTGGCTCTACTGGAGAGGATCCAAAAATGTTGGCCAACTTCAAGGATCTTCTGGAAAAAGTTTTTGTCTTGGATCCAGACAAGAGGTTGACTGTGTCAGAAGCATTGAATCACTCATTCATCACTGGATACCTGCCACTGGTTTGA 2997 0.4201 MVTDGHKHRRSISPGNSDKSSKRHKHRHHHRRHHRHRHGSRKRDEENEYDCETVPAVPSPIPATNSAQNRHMPVDDAEEGEILEVEDGDVRKKQIASYSEADKANSGLHANNSKVRSEGISDEIIFSPAFDAEDRTCRQNNIGHRMHEDEGSPNLLSASPKYGKDARGSTNNMGNGHLNPKSPKREKRRSGEIGSYKGNEIVKGEYDDDLEVDGGKVNYHRNSSSKSGEKYRSGHLPSRDRYRSRSRSNDHARDRSRSRSIVEEHRRHSGEQGDYPYAGRSKSDREHDDERMVVRRSEIYRSREARDTSMDMGVDRDLQREKKRENSRNREVDRVCRREKEHGSSHVRHRRDAERGKSREKEDDSGRRRENERDRSRETVYERDMRREKQRDRSRDRTRGDGRDRVWESRQNDKNQERDKSKETEKEKKEDRNRHKYKDIVNGKGEHLHCNESYDSRDRYRRHSRHEETEWHRERKLNSEPVKVYNSMDSTLVDDENKLDRGEDEDDLDEKVTLQLPDQEEEDLNRIKEESRRRREAILEKYKKQQQQQEEQTTEIEGKDKQTEETPPAIPKALYGKNNDVDGAEVSFSVGKSPAKNGNVASGKISVAGGLREGTPKSERSDDMFCDDIFGETPTGVRKLGKGDGLQIERGGLHDNWDDAEGYYSYRFGEILDGRYEVTAAHGMGVFSTVVRAKNLKDGNGEPEEVAIKIIRSNDTMYKAGMDESVILKKLVGADLDDKRHCVRFLSSFKYRNHLCLVFESLHMNMREVLKKFGRNIGLKLTAVRTYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLTYDHPLDMWSVGCCLYELYSGKVLFPGSTNNDMLRLHMELKGPFPKKMLRKGAFTEQHFDLDLNFFASEEDPVTKKTIKRMIVNIKPKDIGTIITGSTGEDPKMLANFKDLLEKVFVLDPDKRLTVSEALNHSFITGYLPLV* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0937 998 MobiDBLite consensus disorder prediction 512 529 - -
Lan9g0937 998 SMART serkin_6 676 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0937 998 MobiDBLite consensus disorder prediction 99 116 - -
Lan9g0937 998 MobiDBLite consensus disorder prediction 541 566 - -
Lan9g0937 998 Gene3D Transferase(Phosphotransferase) domain 1 736 992 - -
Lan9g0937 998 MobiDBLite consensus disorder prediction 164 178 - -
Lan9g0937 998 MobiDBLite consensus disorder prediction 201 216 - -
Lan9g0937 998 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 252 992 - -
Lan9g0937 998 Gene3D Phosphorylase Kinase; domain 1 647 735 - -
Lan9g0937 998 MobiDBLite consensus disorder prediction 541 578 - -
Lan9g0937 998 ProSiteProfiles Protein kinase domain profile. 676 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0937 998 MobiDBLite consensus disorder prediction 1 116 - -
Lan9g0937 998 CDD STKc_PRP4 675 991 IPR044092 GO:0004674|GO:0006468|GO:0045292
Lan9g0937 998 SUPERFAMILY Protein kinase-like (PK-like) 663 996 IPR011009 -
Lan9g0937 998 PANTHER DUAL SPECIFICITY PROTEIN KINASE 252 992 - -
Lan9g0937 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Lan9g0937 998 MobiDBLite consensus disorder prediction 223 480 - -
Lan9g0937 998 MobiDBLite consensus disorder prediction 20 40 - -
Lan9g0937 998 MobiDBLite consensus disorder prediction 144 529 - -
Lan9g0937 998 Coils Coil 414 434 - -
Lan9g0937 998 Pfam Protein kinase domain 679 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0937 998 MobiDBLite consensus disorder prediction 1 19 - -
Lan9g0937 998 Coils Coil 528 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0937 Lan-Chr9 15688620 15696747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0937 753 992 MAP Kinase Gene Family AT2G46070 32.645 1.61e-25 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lan9g0937 Pkinase 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0937 K08827 - gmx:100776908 1147.5