Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan9g0933 | ATGAGAAATATGCAAAGCTTCAAGACAGTTCAAGCAACTTCTCAACTTTATTGCCACTCTTCTTTTTTGCTTAGGGGAGATGACACTAACAGAAATCCACCACGTTTCTCTGATCTTGGAGACCTTCAACATTCTACTTCTGTGTTTCAACATGAAGATGCTGTTGATTTAAGTTCAAGCTCAACATTTAGTGTAAAATCTAGCAATGTAGCTATTGGTGGTAGTAACATGCAGTATGGAACAAGGCACACGAATCTGGGTCCTGCTGAGATTGTTTCAACTGGGGGAGGGTGCATGGACATGCACCAGAAGGAAATTGCCATGGCAGCTTTGCCTTTAGGAAATGGTCCTGTTGAGAAATGGAGTGATTCTGGCATAGCAGATAATAGCCAACACACTGATGATACTTCAACTGATATTGACACTGATGATAAAAACCAATGCAATAGAGCTCAGCATGGGTCACTTATAGTTGTGGAATCCAAAGATCAGACAAAGGCCAAACCTGAAGATCATAAGACTCTTCGTAGGTTGGCTCAGAATCGTGAGGCTGCAAGGAAGAGTCGGTTAAGGAAAAAGGCATATGTACAACAATTGGAGAACAGTCGAGTAAAGCTTGCACAATTAGAGCTAGAGCTTCAACGAGCACGTCAGCAGGGGATATTTATTGCAACTCGTGGGGATAATTCTCATTCGGCTGTTGGAAATGGTGCCTTAGCATTTGACATGGAGTATGCCCGATGGGTTGATGAGCATCAACGATTTCTCAATGACCTAAGATCAGCTATAAATTCTCAAATCGGTGACAATGATTTACATCTACTTGTTGATGGTGTCATGGCACATTATGATGAATTATTTAGGTTAAAGAGTATCGGAGCGAAGGCTGATGTATTCCACATGCTTAGTGGGATGTGGAAGACACCTGCAGAAAGATGGTTTATGTGGCTTGGTGGATTCCGTTCCTCCGAACTTCTTAAGATAGTTAAGAACCACCTTGAGCCGTTAACAGAACAGCAGTCGGTGGGCATTGATAATCTGCTGCACTCTTCGCAACAGGCCGAGGATGCTTTATCTCAAGGCATGGAAGCATTACAACAGTCTCTTATAGAGACACTTTCTTGCAGCTCACTAGGACCCACTGGTACAGGAAACGTTGCTGATTATATGGGCCAAATGGCAATTGCGATGAGCAAGCTTGGCAAAGTAGAAAGTTTCCTTCATCAGGCTGATCTCTTGAAGCAAGAAACTCTGCAACAGCTGCAACGAATTCTGACTACACGACAAGCTGCTCGGGCGCTCATTGTTATAAATGATTTCATTTCGAGACTAAGAGCGCTTAGTTCATTATGGTTAGCACGCCCTAGCGAGAACTCTGTGATGAGTTGCTGCGACCCTCAAATATAG | 1407 | 0.4321 | MRNMQSFKTVQATSQLYCHSSFLLRGDDTNRNPPRFSDLGDLQHSTSVFQHEDAVDLSSSSTFSVKSSNVAIGGSNMQYGTRHTNLGPAEIVSTGGGCMDMHQKEIAMAALPLGNGPVEKWSDSGIADNSQHTDDTSTDIDTDDKNQCNRAQHGSLIVVESKDQTKAKPEDHKTLRRLAQNREAARKSRLRKKAYVQQLENSRVKLAQLELELQRARQQGIFIATRGDNSHSAVGNGALAFDMEYARWVDEHQRFLNDLRSAINSQIGDNDLHLLVDGVMAHYDELFRLKSIGAKADVFHMLSGMWKTPAERWFMWLGGFRSSELLKIVKNHLEPLTEQQSVGIDNLLHSSQQAEDALSQGMEALQQSLIETLSCSSLGPTGTGNVADYMGQMAIAMSKLGKVESFLHQADLLKQETLQQLQRILTTRQAARALIVINDFISRLRALSSLWLARPSENSVMSCCDPQI* | 469 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan9g0933 | 468 | MobiDBLite | consensus disorder prediction | 119 | 154 | - | - | |
Lan9g0933 | 468 | Pfam | bZIP transcription factor | 172 | 205 | IPR004827 | GO:0003700|GO:0006355 | |
Lan9g0933 | 468 | PANTHER | BZIP FAMILY TRANSCRIPTION FACTOR | 41 | 457 | - | - | |
Lan9g0933 | 468 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 171 | 215 | IPR004827 | GO:0003700|GO:0006355 | |
Lan9g0933 | 468 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 41 | 457 | - | - | |
Lan9g0933 | 468 | CDD | bZIP_HBP1b-like | 173 | 225 | - | - | |
Lan9g0933 | 468 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 176 | 191 | IPR004827 | GO:0003700|GO:0006355 | |
Lan9g0933 | 468 | ProSiteProfiles | DOG1 domain profile. | 238 | 454 | IPR025422 | GO:0006351|GO:0043565 | |
Lan9g0933 | 468 | SUPERFAMILY | Leucine zipper domain | 173 | 213 | IPR046347 | GO:0003700|GO:0006355 | |
Lan9g0933 | 468 | Pfam | Seed dormancy control | 256 | 330 | IPR025422 | GO:0006351|GO:0043565 | |
Lan9g0933 | 468 | MobiDBLite | consensus disorder prediction | 134 | 148 | - | - | |
Lan9g0933 | 468 | SMART | brlzneu | 169 | 238 | IPR004827 | GO:0003700|GO:0006355 | |
Lan9g0933 | 468 | Gene3D | - | 172 | 221 | - | - | |
Lan9g0933 | 468 | Coils | Coil | 192 | 219 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan9g0933 | Lan-Chr9 | 15658583 | 15662470 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan9g0933 | 6 | 457 | bZIP Transcription Factor Family | AT1G68640 | 57.265 | 7.96e-168 | 479 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Lan9g0933 | DOG1 | 1.2e-28 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan9g0933 | K14431 | - | gmx:100777181 | 652.514 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan11g0728 | 11 | 6427041 | 6430740 | Lan9g0933 | 9 | 15658583 | 15662470 | LSH | |
Lan2g0838 | 2 | 18487044 | 18491775 | Lan9g0933 | 9 | 15658583 | 15662470 | LSH |