Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0927 ATGCAATTCTTCGCTGAGAAAATGCACCACCAGAAGATGGAGTTCTGTGACTACATCGAAGCATTGGAAGAAGAAAGAAAAAAAATTCAGGTCTTCAACAAAGAACTCCCTTTGTCCTTGGAGCTTGTCACGCAAGCCATTATAGCGTGTAAGCAGCAGTTATCTGGAACGATGGCAGAGTATAATTTGAATGATCAATTGGAGTGTTCTGAGCAGACCTCAACGGAGGAAGGACCAGTTTTTGAGGAGTTCATGCCTATAAAGAAAAGATCTTCCCCTGATTATGATGATGGAGATGATGATGAGGAACAACATTCTCACAAGATTCTAAAGGATAGCACTAAATCAGATTGGCTCAGATCTGTTCAGTTGTGGAATCCTGATCCCCCTTCTACAAATGAGGATGTGCCTAGAAAAGCCTCTATTGAAGTAGTGAAGAGGAATGGTGGTGGTGCTTTTCAGCCATTTCAAAGAGATGAAATTACTAATGGAAAGGCCAATAATGCATCATCAAATGATAAAGCACCCTCTTCTTCTCCACAAATACCAGCAACAAGTTCAACAGGACCAGTTACAGGAGAAAATGTTGATGGAAGTAGCAAAAACGAGGATCAAGGGCAGAAAAAGAAGCGAAGATCCTGGTCACAAGAGTTACATAAACGCTTTTTGCATGCTCTTCAACAACTTGGAGGTGCAGAACTTGCCACACCAAAACAGATCAGAGATCTAATGAAGGTTGATGGCCTCACAAATGATGAAGTCAAAAGTCATTTACAGAAATTTCGTCTGCACCACAGAAGACCAAACTCAATTATTCGCAACAATGCTAATTCACAAGCAGCTCCCTTGTTTCTTGTGGGGAACATTTTTGTTCAACCACCAGAATATGCTGCAGTAGCTACCTCATCAGGGGAATTGACCACAGATACTGCACCGACCGGAATTTATGCACCTGTGGCTTCACATCCTCCAGCTTCCACACACACATCAGAAGCTTCAATTAAGAAGCTACAGGTTAAGCAATTAGAGTTATCTGAACATTCAAATTCAGAAGGAAGGGCTAATCATGGTGAAGGGGCTGGTAATTCAAACTCTCCTGACTCGTCATCCTCTACACATACCACCACAACTTCACCAGGCTATTAA 1146 0.4197 MQFFAEKMHHQKMEFCDYIEALEEERKKIQVFNKELPLSLELVTQAIIACKQQLSGTMAEYNLNDQLECSEQTSTEEGPVFEEFMPIKKRSSPDYDDGDDDEEQHSHKILKDSTKSDWLRSVQLWNPDPPSTNEDVPRKASIEVVKRNGGGAFQPFQRDEITNGKANNASSNDKAPSSSPQIPATSSTGPVTGENVDGSSKNEDQGQKKKRRSWSQELHKRFLHALQQLGGAELATPKQIRDLMKVDGLTNDEVKSHLQKFRLHHRRPNSIIRNNANSQAAPLFLVGNIFVQPPEYAAVATSSGELTTDTAPTGIYAPVASHPPASTHTSEASIKKLQVKQLELSEHSNSEGRANHGEGAGNSNSPDSSSSTHTTTTSPGY* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0927 381 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 209 264 IPR006447 GO:0003677
Lan9g0927 381 SUPERFAMILY Homeodomain-like 207 267 IPR009057 -
Lan9g0927 381 MobiDBLite consensus disorder prediction 70 112 - -
Lan9g0927 381 MobiDBLite consensus disorder prediction 355 381 - -
Lan9g0927 381 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 377 - -
Lan9g0927 381 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 377 IPR044787 GO:0003700|GO:0006355
Lan9g0927 381 MobiDBLite consensus disorder prediction 160 200 - -
Lan9g0927 381 MobiDBLite consensus disorder prediction 315 381 - -
Lan9g0927 381 MobiDBLite consensus disorder prediction 82 112 - -
Lan9g0927 381 Gene3D - 208 266 - -
Lan9g0927 381 MobiDBLite consensus disorder prediction 148 214 - -
Lan9g0927 381 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 206 266 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0927 Lan-Chr9 15582135 15584502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0927 3 320 G2-like Transcription Factor Family AT1G68670 46.291 5.08e-74 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan9g0927 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0927 - - gmx:100819750 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0721 11 6377815 6380399 Lan9g0927 9 15582135 15584502 LSH