Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan9g0926 | ATGCAAACTCACTCTTTTTCCTACATATCTTCCTCTAATGGAAGTAGTAGTAATAATGCATTCTTTGAAGCTGATGAAGTTGATGATGAAGCCTCCATTTTCCTTTCTCTTGGCCCTCCTGGCCAACACAACCCCAAACCTATGTCTTCCTTAAACCACTCTACCACTACTCTTTGCCAAGCCCAAAACCCTACTATTTGTGATGATCATAGTGGTATAACAGTTGCATTACACATTGGTCTTCCTTCCACAACACAAAACATAAACCCTGCTAACACAAAACCTGATTATTTGACTTCAACACCATTGCAGGGTCAGTATTGGATTCCTTCTCCTGCTCAAATCCTCATTGGACCCACCCAGTTCTCTTGCTCAGTCTGTAACAAAATGTTCAACCGTTTCAACAACATGCAGATGCATATGTGGGGACATGGGTCACAATACAGAAAAGGAGCTGAATCATTGAGAGGGGTGAAACCAGCTTCTTCAATGCTAAGGTTACCATGCTATTGTTGTGCTGAGGGTTGCAAGAACAACATAGATCACCCAAGGTCAAGGCCATTGAAGGATTTCAGGACCCTTCAAACACACTACAAGAGGAAGCATGGTGCAAAGCCATTTGGGTGTAGAAAGTGTGGGAAACCATTTGCTGTAAGAGGGGATTGGAGAACACATGAGAAGAATTGTGGAAAGCTTTGGTTTTGTATTTGTGGTTCTGATTTCAAGCACAAGAGATCTCTCAAAGACCATGTTCGTGCCTTTGGTGATGGACATGCTCCTCATACGGTAGAAGGTTGTGGTGATCAAAATTTGATGGGAGATGAAGATTTGCTATTAGGTGATGAAGATGAAGATGATGATGAGGAGTTTGATGAAGATGACACTAACAATGAAAATGGTTTTCACTTTTAA | 912 | 0.4156 | MQTHSFSYISSSNGSSSNNAFFEADEVDDEASIFLSLGPPGQHNPKPMSSLNHSTTTLCQAQNPTICDDHSGITVALHIGLPSTTQNINPANTKPDYLTSTPLQGQYWIPSPAQILIGPTQFSCSVCNKMFNRFNNMQMHMWGHGSQYRKGAESLRGVKPASSMLRLPCYCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVEGCGDQNLMGDEDLLLGDEDEDDDEEFDEDDTNNENGFHF* | 304 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan9g0926 | 303 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 122 | 149 | IPR013087 | - | |
Lan9g0926 | 303 | SUPERFAMILY | beta-beta-alpha zinc fingers | 190 | 227 | IPR036236 | - | |
Lan9g0926 | 303 | MobiDBLite | consensus disorder prediction | 277 | 303 | - | - | |
Lan9g0926 | 303 | PANTHER | ZINC FINGER PROTEIN WIP2 | 3 | 296 | IPR043584 | GO:0003700|GO:0010468 | |
Lan9g0926 | 303 | PANTHER | ZINC FINGER PROTEIN WIP6 | 3 | 296 | - | - | |
Lan9g0926 | 303 | MobiDBLite | consensus disorder prediction | 277 | 295 | - | - | |
Lan9g0926 | 303 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 124 | 144 | IPR013087 | - | |
Lan9g0926 | 303 | Gene3D | Classic Zinc Finger | 166 | 254 | - | - | |
Lan9g0926 | 303 | SUPERFAMILY | beta-beta-alpha zinc fingers | 115 | 144 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan9g0926 | Lan-Chr9 | 15564317 | 15565850 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan9g0926 | 29 | 263 | C2H2 Transcription Factor Family | AT1G13290 | 71.951 | 2.11e-121 | 348 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Lan9g0926 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan9g0926 | - | - | aprc:113870355 | 438.343 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan11g1015 | 11 | 11402318 | 11405710 | Lan9g0926 | 9 | 15564317 | 15565850 | LSH |