Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0926 ATGCAAACTCACTCTTTTTCCTACATATCTTCCTCTAATGGAAGTAGTAGTAATAATGCATTCTTTGAAGCTGATGAAGTTGATGATGAAGCCTCCATTTTCCTTTCTCTTGGCCCTCCTGGCCAACACAACCCCAAACCTATGTCTTCCTTAAACCACTCTACCACTACTCTTTGCCAAGCCCAAAACCCTACTATTTGTGATGATCATAGTGGTATAACAGTTGCATTACACATTGGTCTTCCTTCCACAACACAAAACATAAACCCTGCTAACACAAAACCTGATTATTTGACTTCAACACCATTGCAGGGTCAGTATTGGATTCCTTCTCCTGCTCAAATCCTCATTGGACCCACCCAGTTCTCTTGCTCAGTCTGTAACAAAATGTTCAACCGTTTCAACAACATGCAGATGCATATGTGGGGACATGGGTCACAATACAGAAAAGGAGCTGAATCATTGAGAGGGGTGAAACCAGCTTCTTCAATGCTAAGGTTACCATGCTATTGTTGTGCTGAGGGTTGCAAGAACAACATAGATCACCCAAGGTCAAGGCCATTGAAGGATTTCAGGACCCTTCAAACACACTACAAGAGGAAGCATGGTGCAAAGCCATTTGGGTGTAGAAAGTGTGGGAAACCATTTGCTGTAAGAGGGGATTGGAGAACACATGAGAAGAATTGTGGAAAGCTTTGGTTTTGTATTTGTGGTTCTGATTTCAAGCACAAGAGATCTCTCAAAGACCATGTTCGTGCCTTTGGTGATGGACATGCTCCTCATACGGTAGAAGGTTGTGGTGATCAAAATTTGATGGGAGATGAAGATTTGCTATTAGGTGATGAAGATGAAGATGATGATGAGGAGTTTGATGAAGATGACACTAACAATGAAAATGGTTTTCACTTTTAA 912 0.4156 MQTHSFSYISSSNGSSSNNAFFEADEVDDEASIFLSLGPPGQHNPKPMSSLNHSTTTLCQAQNPTICDDHSGITVALHIGLPSTTQNINPANTKPDYLTSTPLQGQYWIPSPAQILIGPTQFSCSVCNKMFNRFNNMQMHMWGHGSQYRKGAESLRGVKPASSMLRLPCYCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVEGCGDQNLMGDEDLLLGDEDEDDDEEFDEDDTNNENGFHF* 304
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0926 303 ProSiteProfiles Zinc finger C2H2 type domain profile. 122 149 IPR013087 -
Lan9g0926 303 SUPERFAMILY beta-beta-alpha zinc fingers 190 227 IPR036236 -
Lan9g0926 303 MobiDBLite consensus disorder prediction 277 303 - -
Lan9g0926 303 PANTHER ZINC FINGER PROTEIN WIP2 3 296 IPR043584 GO:0003700|GO:0010468
Lan9g0926 303 PANTHER ZINC FINGER PROTEIN WIP6 3 296 - -
Lan9g0926 303 MobiDBLite consensus disorder prediction 277 295 - -
Lan9g0926 303 ProSitePatterns Zinc finger C2H2 type domain signature. 124 144 IPR013087 -
Lan9g0926 303 Gene3D Classic Zinc Finger 166 254 - -
Lan9g0926 303 SUPERFAMILY beta-beta-alpha zinc fingers 115 144 IPR036236 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan9g0926 Lan-Chr9 15564317 15565850 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0926 29 263 C2H2 Transcription Factor Family AT1G13290 71.951 2.11e-121 348
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan9g0926 None None None
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0926 - - aprc:113870355 438.343
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1015 11 11402318 11405710 Lan9g0926 9 15564317 15565850 LSH