Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0923 ATGGATGGAGGTAGTTGTAATGATGAAAGCACCGCAACTGACTCACTTTCAATAACCATATCTCCCACAACAACCCTATTAACATTCACTGCCTTGTCAAAGAAAGTGTTGCCACTACCTCTATCCAATAATCTATGTCGCGCTGGCAGTGGTGTCAGCGTGATAGTTGACTCGGATAGTGGCAGTGGCGTAGAAGCGGAGTCTCGGAAACTCCCATCTTCTAAGTACAAAGGTGTGGTTCCCCAGCCAAACGGACGTTGGGGCGCTCAAATTTACGAGAAGCACCAACGTGTTTGGTTGGGCACCTTTAACACCGAAGAGGAAGCTGCCAAAGCCTACGATACCGCGGCTCAGCGGTTCCGTGGCAAGGACGCCGTAACAAACTTCAAGCCACCTAGCAGCTCCGTCGTCGTAGACGGCGGCAACAACGATGACACAGAAGCCGAGTTCCTGAGCTCTCATTCGAAATCCGAGATCGTGGACATGCTGAGGAAGCACACCTACAATGACGAGCTGGAACAGAGCAAGCGCAACCGGGGCTTTAACGACCGTTCTCTCAGCCGCAGCACCTCCGCAAACAACGGTGTCGATTGTTACTTTTCCGGCGCGTCTGGGAACAAAGCGCGTGAGCAGCTATTCGAGAAAGCGGTTACGCCCAGCGACGTAGGGAAGCTGAACCGGTTAGTGATACCGAAGCAACACGCGGAGAAGCACTTTCCGTTACAAAACGGCGTTAACGGAATTGTAGCAGGGAAGGGTGTGCTACTGAACTTTGAGGATGTTGGAGGGAAAGTGTGGCGGTTCCGTTACTCATATTGGAATAGTAGTCAAAGTTATGTTCTCACTAAAGGGTGGAGCCGGTTCGTGAAGGATAAGAATCTAAAAGCCGGTGATACGGTTTTTTTCCATAAGTCGACCGGACCGGATAAGCAGATGTATATTGACTGGAAAGTAAAGAATGTTGTTAACGAGGTTCGGATTGTCGGATCGGTTGGACCAATTGTGGAGCCGGTTCAGATGTTTCGGCTTTTTGGGGTAAACATTTTAAAACTACCTGGGTCTGATTCTAATGGTAATATTAATAGTGCTAGTAGCATTGGTGGGTGCTCCAATGGGAAGAGGAGAGAGATGGGAATGTTTACATTAGAGTGCAGCAAGAAGCCTAAAATCATTGCAACTTTGTAA 1185 0.4886 MDGGSCNDESTATDSLSITISPTTTLLTFTALSKKVLPLPLSNNLCRAGSGVSVIVDSDSGSGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNTEEEAAKAYDTAAQRFRGKDAVTNFKPPSSSVVVDGGNNDDTEAEFLSSHSKSEIVDMLRKHTYNDELEQSKRNRGFNDRSLSRSTSANNGVDCYFSGASGNKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQNGVNGIVAGKGVLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKDKNLKAGDTVFFHKSTGPDKQMYIDWKVKNVVNEVRIVGSVGPIVEPVQMFRLFGVNILKLPGSDSNGNINSASSIGGCSNGKRREMGMFTLECSKKPKIIATL* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0923 394 SMART B3_2 213 320 IPR003340 GO:0003677
Lan9g0923 394 ProSiteProfiles AP2/ERF domain profile. 75 130 IPR001471 GO:0003700|GO:0006355
Lan9g0923 394 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 4 394 IPR044800 GO:0003700
Lan9g0923 394 Pfam B3 DNA binding domain 213 314 IPR003340 GO:0003677
Lan9g0923 394 ProSiteProfiles B3 DNA-binding domain profile. 213 320 IPR003340 GO:0003677
Lan9g0923 394 CDD B3_DNA 212 305 IPR003340 GO:0003677
Lan9g0923 394 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Lan9g0923 394 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Lan9g0923 394 Gene3D AP2/ERF domain 74 131 IPR036955 GO:0003700|GO:0006355
Lan9g0923 394 SUPERFAMILY DNA-binding pseudobarrel domain 211 310 IPR015300 -
Lan9g0923 394 SMART rav1_2 75 136 IPR001471 GO:0003700|GO:0006355
Lan9g0923 394 Pfam AP2 domain 74 122 IPR001471 GO:0003700|GO:0006355
Lan9g0923 394 Gene3D - 201 325 IPR015300 -
Lan9g0923 394 CDD AP2 74 129 IPR001471 GO:0003700|GO:0006355
Lan9g0923 394 SUPERFAMILY DNA-binding domain 74 130 IPR016177 GO:0003677
Lan9g0923 394 PANTHER PROTEIN RAV1, PUTATIVE-RELATED 4 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0923 Lan-Chr9 15526667 15528483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0923 1 394 B3 DNA Binding Superfamily AT1G25560 57.250 1.37e-135 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-RAV Lan9g0923 B3 1.3e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0923 K09287 - gmx:100801107 510.76