Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0911 ATGTCAGCAATTTCGCCGTCTCCGGCATCTTCCACCGCCGCACCACCACCTACCACCACTACCCCACCACCCAAACAATCACCCTCTTCCCTTGCACCTAGCACTTCAATTTCAACCCCACCACCATCTCAGTCCCCTCCTCCGGCAACACCATCAGCTCCTCCTCCTGCGACACCGGTCCCATTATCATCACCTCCGCCACCACTACCACCCCAGGCTTCACCTCCCCCACCCTCAGTAGCTCCTCCTCCATCATCACCACCATCTTCTCCAGTACCGCCATCATCACCTCCCCCATCACCAGTCCCACCAAGAAATTCTCCACCCCCATCACCAGCTACACCACCATCAAACCCATCACCACCCTCAGATAATTCACCCCCTCCTCCAGCCATTGCACTGCCACCCCAAGGTTCTCCACCGCCTCCACCATCTGTGCCACCCCCTATAAACTCACCTCCACCGCCAGCACCAGTGCCGCTACCTGCGAATTCACCTCCACCACCAGCATCAGTGCTGTCACCTGTGATTTCACCTCCACCGTCAGCATCAGTTCCGCCACCTGTGATTTCACCTCCACCACCAGCATCAGTTCCACCGCCTGTGAACTCACCTCCACCACCAGCATCAGTTCCACCACCTGTGAATTCACCTCCACTGCCAGCAACAACCACCCCTCCTCAAAATTCGCCTCCCCCTCCAGCTTCTACACCTCCAAGAAGTGCACCTCCTCCTCCTAGGATTAGTCCTGATTCTCAACCTACTCCACCTTCAAATTCTACACCAAAGCCATCCCCTCAATCTCCCGCACTCTTGTTGTCACCACCTCCACCCTCGCTTGTAACGCCACCACCATCACAAAATGGAACAGAAAACTCAATCCCGGCACCCGGAAGTAGTGGTGGAAAAGGAATTGGTACTGGAGGTATAGTTGCTATTAGTGTAGTGGCTGGATTTTTTTTGCTTGGCTTCATTGGAGTTGCTATTTGGTGCATCAGGAGGCGAAAGAAAAAAGGGCATGAGAATGGTGGTTATGTCATGCCATCCACTCTTCCCTCGTCACCTGAATCAGATTCATCCTTTTTTAAGGCACATTCTTCAGCTCCTCTTGTACAAAGTGGCTCGGGAAGTGATGTGTATACACCACCATCCGAGCCTGGTGGACTAGGAAACTCTAGGTCATGGTTTTCATACGAAGAGCTAATCAAGGCAACAAATGGTTTTGCAAATCAAAATCTTTTGGGCGAGGGAGGATTTGGTTCGGTATATAAAGGATACCTACCTGATGGGAGAGAGATTGCAGTCAAGCAGTTGAAAATTGGTGGAGGCCAGGGGGAGAGGGAATTCAAAGCTGAAGTTGAAATTATTAGCCGCATACATCATCGTCATTTGGTTTCTTTAGTGGGGTACTGCATTCAAGATAACAAAAGACTGCTTGTCTATGACTATGTTCCCAACAATAACCTTTATTTTCACCTGCATGGTAAAGAGAAAGGTAGGTCTGTGCTAGGCTGGGCAAACCGTGTTAAAATAGCAGCTGGTGCAGCTCGAGGAATAGCTTATCTCCATGAAGACTGTAATCCTCGGGTTATTCACAGGGATATCAAGTCATCAAACATTCTTTTAGATTACAACTTTGAAGCTCAAGTCTCAGATTTTGGGCTAGCTAAATTAGCTCTTGATGCGAATACACATATAACCACACGTGTCATGGGAACTTTTGGGTATGTTGCTCCTGAATATGCATCAAGCGGAAAATTGACTGAGAAGTCTGATGTATACTCTTTTGGAGTCGTGCTTTTGGAGCTCATTACCGGAAGGAAATCAGTAGATACATCTCAACCAATTGGAGATGAAAGTCTAGTTGAATGGGCTCGACCTTTGCTGAGTCATGCTCTTGATAATGAGGAGTATGATAGTTTAGCAGATCCAAGGCTAGAAAAGAACTATGTTGAAAGTGAAATGTTTTGCATGATTGAAGTTGCAGCTGCTTGTGTGCGACATTCGGCTGCAAAGAGACCTCGCATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGCAGCTGCAGATCTAACAAATGGTATGCGACTTGGGGAAAGCGAAGCCTTTAACTCTGCGCAGCAATCTGCCGAAATAAGATTATTTCGGAGGATGGCATTTGGTAGTCAAAATTATAGCTCAGACTTCTATAGCCAGGATAATTTGAATACGTGA 2214 0.4815 MSAISPSPASSTAAPPPTTTTPPPKQSPSSLAPSTSISTPPPSQSPPPATPSAPPPATPVPLSSPPPPLPPQASPPPPSVAPPPSSPPSSPVPPSSPPPSPVPPRNSPPPSPATPPSNPSPPSDNSPPPPAIALPPQGSPPPPPSVPPPINSPPPPAPVPLPANSPPPPASVLSPVISPPPSASVPPPVISPPPPASVPPPVNSPPPPASVPPPVNSPPLPATTTPPQNSPPPPASTPPRSAPPPPRISPDSQPTPPSNSTPKPSPQSPALLLSPPPPSLVTPPPSQNGTENSIPAPGSSGGKGIGTGGIVAISVVAGFFLLGFIGVAIWCIRRRKKKGHENGGYVMPSTLPSSPESDSSFFKAHSSAPLVQSGSGSDVYTPPSEPGGLGNSRSWFSYEELIKATNGFANQNLLGEGGFGSVYKGYLPDGREIAVKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIQDNKRLLVYDYVPNNNLYFHLHGKEKGRSVLGWANRVKIAAGAARGIAYLHEDCNPRVIHRDIKSSNILLDYNFEAQVSDFGLAKLALDANTHITTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKSVDTSQPIGDESLVEWARPLLSHALDNEEYDSLADPRLEKNYVESEMFCMIEVAAACVRHSAAKRPRMGQVVRAFDSLAAADLTNGMRLGESEAFNSAQQSAEIRLFRRMAFGSQNYSSDFYSQDNLNT* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0911 737 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 105 733 - -
Lan9g0911 737 Gene3D Transferase(Phosphotransferase) domain 1 484 694 - -
Lan9g0911 737 MobiDBLite consensus disorder prediction 347 380 - -
Lan9g0911 737 Pfam Protein tyrosine and serine/threonine kinase 411 681 IPR001245 GO:0004672|GO:0006468
Lan9g0911 737 MobiDBLite consensus disorder prediction 10 29 - -
Lan9g0911 737 ProSitePatterns Protein kinases ATP-binding region signature. 414 436 IPR017441 GO:0005524
Lan9g0911 737 MobiDBLite consensus disorder prediction 39 284 - -
Lan9g0911 737 MobiDBLite consensus disorder prediction 340 387 - -
Lan9g0911 737 Gene3D Phosphorylase Kinase; domain 1 388 483 - -
Lan9g0911 737 PANTHER BNACNNG34790D PROTEIN 105 733 - -
Lan9g0911 737 ProSiteProfiles Protein kinase domain profile. 408 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0911 737 CDD STKc_IRAK 414 686 - -
Lan9g0911 737 SUPERFAMILY Protein kinase-like (PK-like) 390 681 IPR011009 -
Lan9g0911 737 SMART serkin_6 408 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0911 737 MobiDBLite consensus disorder prediction 1 300 - -
Lan9g0911 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0911 Lan-Chr9 15275695 15281900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0911 178 733 Trihelix Transcription Factor Family AT1G70460 49.745 1.52e-163 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lan9g0911 PK_Tyr_Ser-Thr 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0911 - - gmx:100794393 764.222