Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0909 ATGCTCATGAAGTACCTAACTCTACTTTGGACTCACCTATCTTGGGTATTAAACTTCCTTCTCTACTACCCCTTTTACAAGCTCCATGATTCTAAGGTGCCCATAATTGAAGAAGAGGTTAGTATATGTGATTATTATGAATCCACAACTACCTCAGAGGAAGGTATAGATTGTGCTGTGTGTCTATGCAAGATTGAAGAAATGGATGAGATTAGAGTGCTGAGATGTGACCATTTATTTCACAGAGATTGTTTGGATAAATGGGTTGGTTTCAAGAATGCCATTTGTCCTCTTTGTAGAGAACCAATGGGTCCAAGAAGGGTTATTACTGAGCTTGGAGCTGAAGTTCTGTTTTTTCAGTTTTGTGCTATTCACAATGATGATGAACATGATACATGGTGGCTTCGTTGA 411 0.3869 MLMKYLTLLWTHLSWVLNFLLYYPFYKLHDSKVPIIEEEVSICDYYESTTTSEEGIDCAVCLCKIEEMDEIRVLRCDHLFHRDCLDKWVGFKNAICPLCREPMGPRRVITELGAEVLFFQFCAIHNDDEHDTWWLR* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0909 136 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 36 107 IPR013083 -
Lan9g0909 136 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 3 128 - -
Lan9g0909 136 PANTHER RING ZINC FINGER PROTEIN-RELATED 3 128 - -
Lan9g0909 136 ProSiteProfiles Zinc finger RING-type profile. 58 100 IPR001841 -
Lan9g0909 136 SMART ring_2 58 99 IPR001841 -
Lan9g0909 136 Pfam Ring finger domain 57 100 IPR001841 -
Lan9g0909 136 SUPERFAMILY RING/U-box 57 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0909 Lan-Chr9 15248776 15249420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0909 36 105 C3H Transcription Factor Family AT3G43430 39.506 1.76e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0909 K16282 - sind:105156745 135.961