Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0906 ATGGCCTCAAAATCAAGAAGAAACTGTGACATTTGTGTGACTCTCATGATAGCTCTCTTTGCAGCTAATATTGTTTTGGCAGATGACAATATTCCTATTCCAGGTGACAAGGCCCAATTGAACAATTGGTTCAATCAAGTTGTGAAACCATTATCTCAAAGAAAGAACACCCTAGACCCTGCACTAGTTGCTGCAGAGAAAGCTCCTACTATTATCAAAGTCATGCAAAATGGCAAGGGAAAATTCAAGACCATCAATCAAGCCATTAAAAGCATTCCTAAAGGGAACACTAAGCGTGTGATTATATATATTGGGAGTGGAACTTATAGAGAGAAAATAAAGATCGAAAGGGAAAAACCTTTTATTACATTGTATGGAGCTCCAGGGAGCATGCCAAACTTGACTTACGGGGGCACTGCACTCAAATATGGCACTGTGGATAGTGCTACATTAATTGTTGAATCTGATTACTTTGTGGCAGTAAATATGATCATCTCGAATTCTGCACCAAAACCTGATGGAAAGACCAAAGGAGGTCAAGCACTTGCATTGAGAGTTTTTGGGGATAAAGCGGCATTCTATAAAGTTACACTATTGGGATTTCAGGATACGTTATGTGATGATGCACATTGGCATCTTTACAAAGATTGCTTGATTCAAGGCACCGTTGATTTTGTTTTTGGAAATGGAAAATCATTGTTTGTGAATACTGAGTTAAGAGTACTTGGTGATCATGAAATGTCAGTAATAACAGCACATGGAAGGGATAAGAAGTCAGATGATACCGGTTACTCATTTGTGCTATGTGATGTAACTGGAACTGGCACCGGAACTATCTTGGGAAGAGCATGGATGTCTAAATCGAGAGTGGTCTTTGCTTATTCCAATATAGGCAATATGGTCAATGACACAGCATGGAGTAACAACCACCACCCTGAATATGACAAAGATCTATATTTTGGAGAATACAAGAATAAGGGACCTGGTGCAGATCCAAAAGGGCGTTACAAGTATACAAAACAACTTAGTCCTGCAGAGGTTAAACCTTTTATAACACTTGACTATATTAAAGGTGCAAATTGGCTACTTCCTCCTCCAAATCCTAAGGTGTAA 1113 0.3899 MASKSRRNCDICVTLMIALFAANIVLADDNIPIPGDKAQLNNWFNQVVKPLSQRKNTLDPALVAAEKAPTIIKVMQNGKGKFKTINQAIKSIPKGNTKRVIIYIGSGTYREKIKIEREKPFITLYGAPGSMPNLTYGGTALKYGTVDSATLIVESDYFVAVNMIISNSAPKPDGKTKGGQALALRVFGDKAAFYKVTLLGFQDTLCDDAHWHLYKDCLIQGTVDFVFGNGKSLFVNTELRVLGDHEMSVITAHGRDKKSDDTGYSFVLCDVTGTGTGTILGRAWMSKSRVVFAYSNIGNMVNDTAWSNNHHPEYDKDLYFGEYKNKGPGADPKGRYKYTKQLSPAEVKPFITLDYIKGANWLLPPPNPKV* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0906 370 Pfam Pectinesterase 73 358 IPR000070 GO:0030599|GO:0042545
Lan9g0906 370 SUPERFAMILY Pectin lyase-like 68 363 IPR011050 -
Lan9g0906 370 Gene3D - 66 365 IPR012334 -
Lan9g0906 370 ProSitePatterns Pectinesterase signature 2. 219 228 IPR033131 -
Lan9g0906 370 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 37 363 - -
Lan9g0906 370 PANTHER PECTINESTERASE 63-RELATED 37 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0906 Lan-Chr9 15215637 15217736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0906 7 366 Carbohydrate Esterase AT5G07410 53.463 3.81e-139 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0906 K01051 - gmx:100816036 511.531