Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0901 ATGTTTTTACATATCCTTCATCCAATGGAAAGGAAAGGAGATATAACTTTCTTTTGCTTAGCTTTACTCTTCTTGTGGACTTCAGTAACTGGATTACTTTCTCCTAAAGGTGTCAACTTTGAAGTTGAGGCTCTTATGGCCATAAAGTATTCTCTGATGGATCCTCATTCTGTGTTAAGTAATTGGGATGGTGATGCTGTGGATCCATGCAACTGGGCTATGGTTACTTGTTCTTCTGATCATTTTGTAATTGCCTTAGGGATTCCAAGCCAGAATATATCTGGTACTCTCTCACCAAGCATAGGCAACTTAACAAATCTTCAGACAGTGCTTATGCAGGATAATAATATATCAGGACCAATACCCTCTGAGATTGGAAGGCTTCAAAAACTTCAAACTCTTGATCTTTCTGATAATTTCTTCATTGGTCAACTCCCAGATTCTTTGTCCAACATGAAGGGTCTTCATTATTTGAGGATAAACAATAATAGTCTCTCTGGAACAATTCCTCCCTCTATAGCTAACATGACTCAACTTGCTTTTCTGGATATCTCCTACAATAACTTGAGTGGACCTGTACCAAGATTAAATGCAAAAACATTCAGTATTGTAGGCAACCCTCAGATATGTGCCACTGGAATTGAGCAAAACTGTTTTAGGACAACTCTGATTCCTTCTGCTATAAATAATTCTCAAGATTCGCAGTCCTCCGGTAAGCCGAAGAGCCACAAAGTTGCCTTGGCATTTGCTTCAAGCCTAAGCTGCATCTGTTTACTAGTACTAGGATTTGGCTTCCTCCTCTGGTGGAGACAGAGATATAACAAGCAAATATTTTTTGATGTTAATGATCAACACCGCGAAGAGATTTGCCTCGGAAACCTCAAAAGGTTCCACTTCAGAGAACTTCAAGTTGCTACAAATAACTTCTGCAGCAAAAACTTGGTTGGCAAAGGTGGTTTTGGAAATGTTTACAAAGGGTATCTCTCAGATGGTTCAGTTATAGCAGTAAAGAGGCTTAAAGATTGTAATGCTATTGGTGGTGAGATCCAATTCCAGACTGAGATCGAAATGATCAGCTTAGCTGTTCACCGGAATCTTCTTCGCCTGTATGGATTTTGCATGACAGCTACAGAAAGGCTCTTGGTTTATCCCTACATGTCTAATGGTAGTGTTGCTTCCCGTCTTAAAGCCAAACCAGCTTTGGATTGGAGTACAAGAAAGAGGGTAGCCTTAGGAGCTGGAAGAGGGTTGCTATATTTGCATGAGCAATGTGACCCTAAGATTATTCACAGGGATGTGAAGGCTGCAAATATTTTGCTTGATGATTATTGCGAGGCCGTTGTCGGAGATTTTGGGTTGGCAAAGCTATTGGATCACCAAGATTCACATGTGACAACAGCAGTAAGAGGTACTGTAGGACACATAGCACCAGAGTATCTATCAACAGGACAATCTTCTGAGAAAACTGATGTGTTTGGGTTTGGAATCCTTCTACTTGAATTGATTTCTGGCCAAAGAGCTCTTGAATTTGGTAAAGCAGCAAATCAAAAAGGTGCAATGCTTGACTGGGTGAAGAAAATCCATCAAGAGAAGAAAATAGACTTGTTAGTTGACAATGACTTGAGGAACAAGTATGATAGGATAGAGCTAGATGAAATTGTTCAAGTAGCTCTTTTATGTACTCAATACCTTCCAAGCAATAGACCAAAGATGTCTGAAGTGATTAGGATGCTTGAAGGAGATGGTCTTGCAGAGAAATGGGAAGCTTCACATAGAGCTGAATCAACAAGTAGAGGACATGAACTCTCTTCTTCAGAGCGCTATTCCGATCTTACTGACGACTCTTCATTACTTGCTCAAGCAATGGAACTTTCTGGACCAAGATGA 1887 0.4017 MFLHILHPMERKGDITFFCLALLFLWTSVTGLLSPKGVNFEVEALMAIKYSLMDPHSVLSNWDGDAVDPCNWAMVTCSSDHFVIALGIPSQNISGTLSPSIGNLTNLQTVLMQDNNISGPIPSEIGRLQKLQTLDLSDNFFIGQLPDSLSNMKGLHYLRINNNSLSGTIPPSIANMTQLAFLDISYNNLSGPVPRLNAKTFSIVGNPQICATGIEQNCFRTTLIPSAINNSQDSQSSGKPKSHKVALAFASSLSCICLLVLGFGFLLWWRQRYNKQIFFDVNDQHREEICLGNLKRFHFRELQVATNNFCSKNLVGKGGFGNVYKGYLSDGSVIAVKRLKDCNAIGGEIQFQTEIEMISLAVHRNLLRLYGFCMTATERLLVYPYMSNGSVASRLKAKPALDWSTRKRVALGAGRGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAANQKGAMLDWVKKIHQEKKIDLLVDNDLRNKYDRIELDEIVQVALLCTQYLPSNRPKMSEVIRMLEGDGLAEKWEASHRAESTSRGHELSSSERYSDLTDDSSLLAQAMELSGPR* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0901 628 Gene3D Transferase(Phosphotransferase) domain 1 386 598 - -
Lan9g0901 628 Pfam Leucine rich repeat N-terminal domain 41 78 IPR013210 -
Lan9g0901 628 SUPERFAMILY Protein kinase-like (PK-like) 288 579 IPR011009 -
Lan9g0901 628 MobiDBLite consensus disorder prediction 589 614 - -
Lan9g0901 628 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 12 628 - -
Lan9g0901 628 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Lan9g0901 628 MobiDBLite consensus disorder prediction 589 608 - -
Lan9g0901 628 Gene3D Phosphorylase Kinase; domain 1 278 385 - -
Lan9g0901 628 Pfam Protein kinase domain 312 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0901 628 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 12 628 - -
Lan9g0901 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Lan9g0901 628 SMART serkin_6 309 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0901 628 Pfam Leucine rich repeat 130 189 IPR001611 GO:0005515
Lan9g0901 628 ProSiteProfiles Protein kinase domain profile. 309 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0901 628 Gene3D Ribonuclease Inhibitor 38 220 IPR032675 -
Lan9g0901 628 SUPERFAMILY L domain-like 41 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0901 Lan-Chr9 15107828 15112306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0901 16 628 Receptor kinase-like Gene Family AT5G16000 74.400 0.0 952
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lan9g0901 Pkinase 1.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0901 - - gmx:100790194 1120.15