Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0899 ATGACGAAGGATACATCAAATGCTGATTCCCAAAATACACGTCTTGGTCTTTTAAAAGATCAAGTTCATTTGGTTAAAAGGAAAGACTCCGATCGCCATGAGATTGCTCCAATCCAAGATCAACTATCATTTGAGAAGGGTTTTTTCATAGTAATTCGTGCATGCCAAATGTTAGCGCAAAAGAACACTGGAATATTATTGGTAGGTGTAGCAGGTCCTTCAGGGGCTGGGAAGACTGTATTTACTGAAAAAATTCTGAGCTTCATGCCCAGCATTGCAGTAATTTCGATGGATAATTACAATGATTCTAGTCGAATTGTTGATGGAAATTTTGATGATCCGCGCTTAACAGACTATGACACTTTGCTCCAGAATCTACATGATTTAAAGGAAGGAAAGTCAGTCCAGGTTCCTATATATGACTTCAAGTCCAGTTCAAGAACAGGATACAGGACAGTAGAACCCCCAAGCTCCCAGATTGTGATTATAGAGGGTATATATGCCTTGAGTGAGAAGTTGCGGCCTTTATTGGACCTTAGAGTATCTGTTACAGGTGGAGTTCACCTTGACCTTGTAAAGCGAGTTATACGTGACATACAACGTGCTGGTCAAGAGCCTGAAGAAATTATTCATCAAATATCTGAGACGGTATATCCAATGTACAAGGCCTATATCGAGCCTGATCTCCAGACCGCACATATAAAAATCACAAATAAGTTCAATCCCTTTACTGGATTCCAGAGCCCTACTTACATATTAAAGTCAACACGGAACTTAACAGCTGATCAAATTAAAGCTGCTCTCCCTGAAGGTTATAAGGAAACAACAGAGCAGACTTATGACATATATCTTCTACCACCCGGTGAAGATCCAGAAACATGCCAATCATATTTACGTATGCGAAATAAGGATGGAAAATACAGTCTCATGTTTGAGGAATGGGTGACAGATACTCCCTTTGTCATATCGCCAAGAATTACTTTTGAGGTCAGTGTGCGCCTCCTTGGTGGACTAATGGCCCTGGGATACACGATAGCTACAATCCTTAAAAGGAACAGCCATGTCTTTTTTGATGATAAGATTTGTGTAAAACTAGATTGGCTTGAGCAACTTAATCGGCACTATATTCAGGTACAAGGAAGAGATCGCTTAGTTGTAAAATGCATAGGTGAACAACTGGGTCTAGAAGGTTCTTACACTCCTCGTACCTACATTGAACAAATTCAACTTGAAAAGCTTGTGGACGAGGTTATGGCCTTGCCAGATGATTTGAGGACAAAGCTCAGCCTAGATGAGGATTTGGTGTCAAGCCCCAAAGAAGCACTTTCTAGAGTCTCCGCCGACAGGGTTGCCATGAGAAATAAAAATATGCGGAGTGGAATGTCACAATCATATACAAATCAAAGGGACAAAAATCTAGCCAAAGTTACTGGATATGTTGCAAACAGTCCAGGGTTTGGTGAAAGAAATTCAGATTCCTCCACAAGGCCAGCAGATCAGAGAGCAATCAGTCAGCTCTCAGAACAAATTTCTGCCCTCAACGATAGAATGGATGAGTTTACAAATCGTATCGAAGAGCTGAGTGCCAAGTTAACCATCAAGAAAAATTCTCCAAGCCATCAAAGTATGTCACTTCAAGCCGAGTCCTGCAATGGGTCTGCTCCCACCTCTTACTTCATCACTAGTCTAGGCAATGGTTCACTGACTGGATCTAAAATGCCAAATCCATCGTCTTCATCGCAATTGGCTAAAGATTCTCCTTTAATGGATGAGATATCAGGTATTACACGTGGTCAGCGTCAGATCATGCACCAATTAGACAATCTCAGTAACCTTCTCCGGGGGAGCTTGGGAGAGAAGCCTCATCAAACAAGAACTAACAGCAGGAAAAAAATTATGAATTCGGATCCTGCCGGAACTCGTCTTATGGTGGTTTTAGCAGTTGGTTGTTTGGGGGCCATCCTGGTGAAGGGATTGTGGACAAGAAATTGA 1992 0.4167 MTKDTSNADSQNTRLGLLKDQVHLVKRKDSDRHEIAPIQDQLSFEKGFFIVIRACQMLAQKNTGILLVGVAGPSGAGKTVFTEKILSFMPSIAVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNLHDLKEGKSVQVPIYDFKSSSRTGYRTVEPPSSQIVIIEGIYALSEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAYIEPDLQTAHIKITNKFNPFTGFQSPTYILKSTRNLTADQIKAALPEGYKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDTPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFFDDKICVKLDWLEQLNRHYIQVQGRDRLVVKCIGEQLGLEGSYTPRTYIEQIQLEKLVDEVMALPDDLRTKLSLDEDLVSSPKEALSRVSADRVAMRNKNMRSGMSQSYTNQRDKNLAKVTGYVANSPGFGERNSDSSTRPADQRAISQLSEQISALNDRMDEFTNRIEELSAKLTIKKNSPSHQSMSLQAESCNGSAPTSYFITSLGNGSLTGSKMPNPSSSSQLAKDSPLMDEISGITRGQRQIMHQLDNLSNLLRGSLGEKPHQTRTNSRKKIMNSDPAGTRLMVVLAVGCLGAILVKGLWTRN* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0899 663 Gene3D - 66 247 IPR027417 -
Lan9g0899 663 Coils Coil 503 537 - -
Lan9g0899 663 MobiDBLite consensus disorder prediction 480 500 - -
Lan9g0899 663 PANTHER URIDINE KINASE 5 653 - -
Lan9g0899 663 Pfam CYTH domain 266 404 IPR023577 -
Lan9g0899 663 SUPERFAMILY CYTH-like phosphatases 272 407 IPR033469 -
Lan9g0899 663 CDD UMPK_like 67 239 - -
Lan9g0899 663 PANTHER PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN 5 653 - -
Lan9g0899 663 MobiDBLite consensus disorder prediction 484 500 - -
Lan9g0899 663 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Lan9g0899 663 Gene3D - 255 412 - -
Lan9g0899 663 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Lan9g0899 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 238 IPR027417 -
Lan9g0899 663 MobiDBLite consensus disorder prediction 615 634 - -
Lan9g0899 663 PRINTS Uridine kinase signature 65 82 - -
Lan9g0899 663 PRINTS Uridine kinase signature 132 147 - -
Lan9g0899 663 PRINTS Uridine kinase signature 188 198 - -
Lan9g0899 663 PRINTS Uridine kinase signature 224 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0899 Lan-Chr9 15083833 15091145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0899 66 236 PRT Gene Family AT4G26510 27.778 4.72e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0899 K00876 - gmx:100781286 1127.08