Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0886 ATGAGAGCCGGGAAAGGGAACATGGAAGAAGAAGAGTACGAGGAAGATGAGTTCGGTTCTTCTAAGAAACAAGGCCCTTCCTCTGTCCCTAACCCCAATAAAGATGCAAAAGCTGTTGACAAGGCTAGTGCAATAAGATCAAAACATTCAGTAACTGAGCAGCGAAGAAGGAGCAAGATAAACGAGAGGTTCCAGATATTAAGGGATCTCATACCTCAATGTGATCAAAAGAGGGACACAGCATCATTCTTATTAGAGGTGATTGATTATGTTCAGTACTTACAGGAGAAGGTGCAAAAGTATGAAGGCTCATATCCAGGTTGGAGCCCTGAGCCCTCGAAATTAATGCCATGGAGAAACAGTCACTGGCGTGTACAAAACTTTGTTGGTCAACCTCAAGTGGTAAAGAATGGTTCAGGTCTGGTATCGCCTTTTCCTGGAAAGCTTGATGAAAGCAACACTAGTATCTCTCCGACCATGCCTTGTGGCAGCCAGAATATGATAGATCCTGATCAGAGCAGGGATATTGCCAGCAAAATATCAGAGACACAACCCGATTTGGCTAGCAAGGGAGTACCTATACCCATGGCTGTGCACTCAAACATGCCAGTTCCTGTCAGAAGTGATGGTGTAATTGCCCATCCTCTCCACGGAACTGTTTCGGATGCACAATCAATTGAATACCCAGCCACCAGTGAACCACAGACCCAGCAGGAGGAACTGACAGTTGAAGGAGGGACAATTAGCATCTCTAGTGTATATTCCCAAGGGTTGCTGAATAATCTGACTCAAGCGCTACAGAGTGCTGGTATAGATCTGTCACAAGCTAGCATCTCAGTTCAGATTAATCTTGGGAAGCGAGCAAAGGAAGGACCAAGCTGTGAAACCTCTTCTCCCAAGAATCATGATAACATCCCTTCTAGGAACCAAGGAATTGCACATTTTAGAGATGCAGGCAATGCAGAAGACTCAGATCAAGCTCAAAAAAGAATGAAAACAACTTATAAGTGA 1011 0.4451 MRAGKGNMEEEEYEEDEFGSSKKQGPSSVPNPNKDAKAVDKASAIRSKHSVTEQRRRSKINERFQILRDLIPQCDQKRDTASFLLEVIDYVQYLQEKVQKYEGSYPGWSPEPSKLMPWRNSHWRVQNFVGQPQVVKNGSGLVSPFPGKLDESNTSISPTMPCGSQNMIDPDQSRDIASKISETQPDLASKGVPIPMAVHSNMPVPVRSDGVIAHPLHGTVSDAQSIEYPATSEPQTQQEELTVEGGTISISSVYSQGLLNNLTQALQSAGIDLSQASISVQINLGKRAKEGPSCETSSPKNHDNIPSRNQGIAHFRDAGNAEDSDQAQKRMKTTYK* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0886 336 MobiDBLite consensus disorder prediction 39 57 - -
Lan9g0886 336 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 333 IPR044295 GO:0003700|GO:0006351|GO:0046983
Lan9g0886 336 MobiDBLite consensus disorder prediction 294 308 - -
Lan9g0886 336 Gene3D - 41 107 IPR036638 GO:0046983
Lan9g0886 336 MobiDBLite consensus disorder prediction 1 57 - -
Lan9g0886 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 42 115 IPR036638 GO:0046983
Lan9g0886 336 Pfam Helix-loop-helix DNA-binding domain 46 95 IPR011598 GO:0046983
Lan9g0886 336 CDD bHLH_AtBIM_like 43 119 - -
Lan9g0886 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 44 94 IPR011598 GO:0046983
Lan9g0886 336 PANTHER TRANSCRIPTION FACTOR BIM2 1 333 - -
Lan9g0886 336 MobiDBLite consensus disorder prediction 288 336 - -
Lan9g0886 336 SMART finulus 50 100 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0886 Lan-Chr9 14913518 14918354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0886 1 333 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 55.522 7.07e-112 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan9g0886 HLH 3.1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0886 - - lang:109361152 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0767 11 7052453 7062438 Lan9g0886 9 14913518 14918354 LSH