Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0869 ATGTTATATACATTTGGATCAGATTCATATAGATCAATTAATCATCAATCAATGGAGGAGAGGAAGTTTGTGTGCAAGTATTGTAGCAAGAGGTTCCCTTGTGGAAAATCATTGGGTGGACACATTAGGATACATATGAATGAACATTCAGTTCAAGCCAATGAAGAGAGAAACAATGCTGCCATGCTCAAGTTTGATGCTATGAGAAAGAAGAAGAGAGATTCATTAGGGTATGGTGATGGTGATGATGGTGATGGTGCTGATGGGAACCTCACTTATGGCTTGAGAGAGAACCCCAAGAAAACAATGAGGTTTGTGCATTCCAATGGCACTAATAATGTGCAGCAACAACTTGACAAGTTCTGCAAAGAATGTGGGAAAGGTTTCCCATCATTGAAAGCTCTTTGTGGTCACATGGCTTGTCACTCAGAGAAAGAGAAGCAGAAATTGGTTTTGGATAGTGAATCTGATACTGAGACCAATTCTGCTCCAAGGAGATCCAAGAGAATGAGGTTCAAGGACAATAGCAACAACAACAACAACAATAATCACCTTTCTTCTTCTTTGGCAAATGGATCTTCTCCTGTATCAGAGGTTGAGCAGGAACAAGAAGAGGTTGCTAGGTGTTTAATGATGTTGTCCAAAGACACTAGATACTATAGTGGTCGTTTTGGTTTGTTTGCTGAGTCTTCTGACAACAATTCTATTGTTGTAGAGGCAAAATCACCTTCTCCTAATACAAAGTTCACTATAAAAAATGGTAAGAATTCTGTGCCTAATGCTTATGAATTTGTGGATAAGAAGCTGCAAAATGGTAAGAAGTTGAAGTCTGCTGAGATTGGTTCTGATTACGATAATTCAGATTCGGGTTACTTCAGTTATGGTCCTAAAAAGATAGACTCAGCTGATTCAAATGGTGGATTTTTTAGGACTCAAGTTCAGTCTTCTAAAGTGGTAGACATGGCTGGGTTTGAGGACTATGATGTTGAATTGAGCAAGGAGTTTAGCAGAGGAAGAAGCATAAGCACTGAATTTAAGAAATTAGTGCATGAGGATTTGGAAAATGGCAGAGAAGATGGAGCTACAATGAGGTCTGATTCAAAGAAGAGACTTATCTATGATTCTCTTGGTTCAAAGAATGTTGCAAATGGTTTCAACAATGATGAAATGTATAAGCATGGTAGAAAAGGGTTGAAGTATGAGTCCTTGAACACTGAAATACAAAATGTTTATGAAGATGATTCGGCATACGAGAGTGACGAAAACAGCTCCGACAGTGATTCCTATACTGCTGCAAAGTCTCACAAAATTAAGGCCCTCAATGGGAAAAAGTCCAGCAAGGGGAAGAACAAGAAGAAGAAGCTGAAGTCAAAGAAAATCAAGGAACATGAGTGTCCAATCTGCAACAGAATTTTCAAGTCAGGCCAAGCCTTAGGAGGTCACAAAAGGTCCCATTTTGTTGGAGGTTCTGAAGAAAACACCCTTGTGATTAGGCCAGCTGGTGCTGCTCCAGCTCCTTGCTTAATTGATCTCAATCTACCTGCTCCAGTTGATGAATAG 1560 0.3955 MLYTFGSDSYRSINHQSMEERKFVCKYCSKRFPCGKSLGGHIRIHMNEHSVQANEERNNAAMLKFDAMRKKKRDSLGYGDGDDGDGADGNLTYGLRENPKKTMRFVHSNGTNNVQQQLDKFCKECGKGFPSLKALCGHMACHSEKEKQKLVLDSESDTETNSAPRRSKRMRFKDNSNNNNNNNHLSSSLANGSSPVSEVEQEQEEVARCLMMLSKDTRYYSGRFGLFAESSDNNSIVVEAKSPSPNTKFTIKNGKNSVPNAYEFVDKKLQNGKKLKSAEIGSDYDNSDSGYFSYGPKKIDSADSNGGFFRTQVQSSKVVDMAGFEDYDVELSKEFSRGRSISTEFKKLVHEDLENGREDGATMRSDSKKRLIYDSLGSKNVANGFNNDEMYKHGRKGLKYESLNTEIQNVYEDDSAYESDENSSDSDSYTAAKSHKIKALNGKKSSKGKNKKKKLKSKKIKEHECPICNRIFKSGQALGGHKRSHFVGGSEENTLVIRPAGAAPAPCLIDLNLPAPVDE* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0869 519 MobiDBLite consensus disorder prediction 413 458 - -
Lan9g0869 519 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 18 519 - -
Lan9g0869 519 SUPERFAMILY beta-beta-alpha zinc fingers 19 50 IPR036236 -
Lan9g0869 519 SMART c2h2final6 120 142 IPR013087 -
Lan9g0869 519 SMART c2h2final6 23 45 IPR013087 -
Lan9g0869 519 SMART c2h2final6 463 485 IPR013087 -
Lan9g0869 519 MobiDBLite consensus disorder prediction 437 458 - -
Lan9g0869 519 Pfam C2H2-type zinc finger 122 144 - -
Lan9g0869 519 Pfam C2H2-type zinc finger 463 485 - -
Lan9g0869 519 Pfam C2H2-type zinc finger 23 46 - -
Lan9g0869 519 Gene3D Classic Zinc Finger 7 76 - -
Lan9g0869 519 MobiDBLite consensus disorder prediction 74 94 - -
Lan9g0869 519 MobiDBLite consensus disorder prediction 147 173 - -
Lan9g0869 519 ProSitePatterns Zinc finger C2H2 type domain signature. 122 142 IPR013087 -
Lan9g0869 519 ProSiteProfiles Zinc finger C2H2 type domain profile. 120 147 IPR013087 -
Lan9g0869 519 SUPERFAMILY beta-beta-alpha zinc fingers 121 485 IPR036236 -
Lan9g0869 519 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 50 IPR013087 -
Lan9g0869 519 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
Lan9g0869 519 ProSiteProfiles Zinc finger C2H2 type domain profile. 463 485 IPR013087 -
Lan9g0869 519 MobiDBLite consensus disorder prediction 174 200 - -
Lan9g0869 519 MobiDBLite consensus disorder prediction 147 201 - -
Lan9g0869 519 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 18 519 - -
Lan9g0869 519 ProSitePatterns Zinc finger C2H2 type domain signature. 465 485 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0869 Lan-Chr9 14545262 14547559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0869 16 519 C2H2 Transcription Factor Family AT1G26610 42.529 2.09e-99 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan9g0869 zf-C2H2_6 1.1e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0869 - - gmx:100805520 498.434