Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0867 ATGTTTGGGTTCAGAAAAGCACAACCCCCAAAGCCTGCTTTTGATTCAGGCACTGAATCAGAAAAGAAGACAACCCTTACTCCGGATAGACGAACCGCTTCAGAGCCTGTTGTGGTGCCAAAATCTAAAGGAAACTATTTCGATGAAGACGACGATGATGATTGGGGGAGAAAGCCTTCATCCACTGCAGCTTCATCAGCTGGTTCAAAAGACAGGTATAAAAACGGTTTCCACGACTCTGGGGGGCTAGAGAACCAAAGTGTTCAAGAGCTGGAAAACTATGCAGTATACAAGTCTGAGGAGACAACAAACAGTGTTAACAATTGCCTGAGGATTGCTGAAGATATCAGAGAGGATGCCTCAAAAACCCTTGACATGTTGCACCAGCAGGGTGAGCAGATAACAAGGACTCACAATATGATTGTTGAAACAGAAAAGGACTTGAGTAAGGGTGAAAAGCTTCTGAACAATCTTGGGGGCATGTTTTCTATGCCCTGGAAGCCAAAGAAGACCCGGGAAATTCAAGGCCCTGTAATTACAGCAGATAAGCCATCCAAGAAGAATATAGCAAGTAAGGAAGATAGAGAAAAGTTGGGGTTAGCTCCTGTGCCTAAGGGAAGATCTGCTCCTACTACACCTCCTAATGAATCAGCCAATGCATATCAGAAAATTGATGTTGAGAAAGCCAAACAGGATGATGCACTCTCAGATTTGAGTGATATCTTGGGTGATTTGAAGGGTATGGCAGTTAATATGGGAAGTGAACTTGACAGGCAAAATAAAGCTCTTGATCATCTTGATGCCGATGTGGATGAGCTGAACTCTCGAGTTAAAGGTGCAAACCAACGTGCGCGCAAATTAGTAGGGTAA 870 0.4391 MFGFRKAQPPKPAFDSGTESEKKTTLTPDRRTASEPVVVPKSKGNYFDEDDDDDWGRKPSSTAASSAGSKDRYKNGFHDSGGLENQSVQELENYAVYKSEETTNSVNNCLRIAEDIREDASKTLDMLHQQGEQITRTHNMIVETEKDLSKGEKLLNNLGGMFSMPWKPKKTREIQGPVITADKPSKKNIASKEDREKLGLAPVPKGRSAPTTPPNESANAYQKIDVEKAKQDDALSDLSDILGDLKGMAVNMGSELDRQNKALDHLDADVDELNSRVKGANQRARKLVG* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0867 289 Gene3D - 222 289 - -
Lan9g0867 289 MobiDBLite consensus disorder prediction 181 219 - -
Lan9g0867 289 SUPERFAMILY SNARE fusion complex 86 157 - -
Lan9g0867 289 CDD SNARE_SNAP25N_23N_29N_SEC9N 93 157 IPR044766 GO:0005484|GO:0031201
Lan9g0867 289 Gene3D - 82 160 - -
Lan9g0867 289 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 1 288 - -
Lan9g0867 289 Coils Coil 256 289 - -
Lan9g0867 289 CDD SNARE_Qc 228 286 - -
Lan9g0867 289 SUPERFAMILY SNARE fusion complex 218 287 - -
Lan9g0867 289 MobiDBLite consensus disorder prediction 44 58 - -
Lan9g0867 289 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 225 287 IPR000727 -
Lan9g0867 289 SMART tSNARE_6 91 158 IPR000727 -
Lan9g0867 289 SMART tSNARE_6 220 287 IPR000727 -
Lan9g0867 289 MobiDBLite consensus disorder prediction 186 201 - -
Lan9g0867 289 PANTHER SNAP25 HOMOLOGOUS PROTEIN SNAP30-RELATED 1 288 - -
Lan9g0867 289 MobiDBLite consensus disorder prediction 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0867 Lan-Chr9 14513159 14516050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0867 215 288 SNARE and Associated Proteins AT3G09740 39.189 6.27e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0867 K18211 - gmx:100804448 474.937