Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0857 ATGAAGGGTAGTACAAGTTCTGAACTTCCACCTGGTTTCAGGTTCCACCCAACTGATGAAGAATTAATTGTGCACTACCTTTGTAACCAAGCCACATCAAAGCCATGCCCTGCTTCTATCATCCCAGAAGTTGATATCTACAAATTTGATCCATGGGAATTGCCTGATAAAACAGACTTTGGAGAAAAGGAATGGTATTTTTTTACCCCAAGGGATAGGAAGTATCCAAATGGGGTGAGGCCTAATAGAGCAACGGTGTCAGGGTATTGGAAAGCAACTGGGACAGACAAATCAATCTATAGTGAATCTAAGCATATTGGGGTCAAGAAAGCCTTGGTTTTTTACAAAGGTAGGCCACCAAAAGGTGTGAAAACAGATTGGATTATGCATGAGTACAGATTGGTTGGATCAAGAAGACAAACCAACAAACAATTTGGGTCCATGAGGCTGGATGATTGGGTCTTGTGCAGGATCTACAAGAAGAAAAACATGGGAAAATCATTGGAGCAAAAAGAGGAATACCCAATAGTCCAAATCAATCTAACAGGAGAAAATGATCATGACACTAAACAGGAAATGCTGAAATTCCCAAGGACTAATTCCCTTGCTAATCTTTTGGATATGGATTACTTGGGTCCAATCTCACAGATATTATATGATGGCTCATATAATTCAACCTTTGACTATCAAATTAACACTGCTAATGTTGGGGTAGACCACTTTGTAAAACCTCAAATGGTAGAATTCACTAATTCTTATGAAGGAGATTCAGGAAAGTACCAAGTGAAAGAGAATAGCACCACCAACCCTTATCAATTTGTAAACCAATTGTATGATCAGACAAAACAAAACCAATAA 858 0.3869 MKGSTSSELPPGFRFHPTDEELIVHYLCNQATSKPCPASIIPEVDIYKFDPWELPDKTDFGEKEWYFFTPRDRKYPNGVRPNRATVSGYWKATGTDKSIYSESKHIGVKKALVFYKGRPPKGVKTDWIMHEYRLVGSRRQTNKQFGSMRLDDWVLCRIYKKKNMGKSLEQKEEYPIVQINLTGENDHDTKQEMLKFPRTNSLANLLDMDYLGPISQILYDGSYNSTFDYQINTANVGVDHFVKPQMVEFTNSYEGDSGKYQVKENSTTNPYQFVNQLYDQTKQNQ* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0857 285 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Lan9g0857 285 Gene3D NAC domain 18 166 IPR036093 GO:0003677|GO:0006355
Lan9g0857 285 PANTHER NAC DOMAIN-CONTAINING PROTEIN 1 1 250 - -
Lan9g0857 285 PANTHER NAC TRANSCRIPTION FACTOR 56 1 250 - -
Lan9g0857 285 SUPERFAMILY NAC domain 6 161 IPR036093 GO:0003677|GO:0006355
Lan9g0857 285 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0857 Lan-Chr9 14383724 14385497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0857 1 217 NAC Transcription Factor Family AT1G69490 65.351 1.00e-109 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan9g0857 NAM 1.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0857 - - gmx:732552 478.789