Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0847 ATGGATCAGCAAAATATGCAAAACCAATGTGTGCACTTTGTTCTATCCACTGATGCAAAACCAAGGCTAAAGTGGACTCCTGAGCTTCACCAAAGATTCACTGATGCAACCAATCAACTTGGAGGACCAGAAAAGGCAACACCAAAGAGTCTTATGAGAGTGATGGGGGTTCCAGGACTCACTTTGTACCATCTGAAGAGTCATTTACAGAAATATAGACTTGGGAAAACACAACAGGTAGAAACATGCTCTGAAAATAAACAAAAAGAAATCAAGAGCAGTGATGATCATTGCAGCAAGGAAATCAATGTTGGGGCCCAGAATCAAATTGCTGAAAACTTGCAGATAGCTAAGGCTCTCCAAATGCAAATGGAAGTACAAAGGAAACTTCACGAACAAATTGAGGTGCAGAAAAATTTGCAACTTAAAATAGAAGCTCAAGGGCAGTATTTACAATCAGTGTTAAAAAAAGCACATGAAGCACTAGGTGGATACAATTCTTCCAAAGTAGGAATAGAACTTACAAAAGCTGAACTTTCTCACCTAGTTACAATAATCAACAATGCTTCTCCAATTTCAGAACTTACAGAAACAAAAGGATTAAGTTTAAGCTATGGTGAGAGGAAACAAGATAGAGGTACTATGTGTTCACTTGAAAGTTCTTTGACATCTTCTGAAAGCTCTGAGAGAAAGGAAGTGAAAAATCCTATGGAATTTAATACTATTGCACTTGAAATGCCATTAATGGAAATTAAGCATGGAGGGAAAGGATCCAATGGAAGAAAGAGAAGTGGTGAAACTGATTCTGATGGTAGCTGTGTTGAACAACCATGTGGTAAAAAATGTGCCAAGAATTTGGAGAAACCCAAGTTGTTAGAATTGATTGACTTGAACAACCAATATGATTGTGACATGGGTTCTGGTTCAAAAACAACATTAGACTTAAATTGCAGTTCAAGCTTTTGGGAAACATGA 975 0.3744 MDQQNMQNQCVHFVLSTDAKPRLKWTPELHQRFTDATNQLGGPEKATPKSLMRVMGVPGLTLYHLKSHLQKYRLGKTQQVETCSENKQKEIKSSDDHCSKEINVGAQNQIAENLQIAKALQMQMEVQRKLHEQIEVQKNLQLKIEAQGQYLQSVLKKAHEALGGYNSSKVGIELTKAELSHLVTIINNASPISELTETKGLSLSYGERKQDRGTMCSLESSLTSSESSERKEVKNPMEFNTIALEMPLMEIKHGGKGSNGRKRSGETDSDGSCVEQPCGKKCAKNLEKPKLLELIDLNNQYDCDMGSGSKTTLDLNCSSSFWET* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0847 324 Pfam MYB-CC type transfactor, LHEQLE motif 115 160 IPR025756 -
Lan9g0847 324 MobiDBLite consensus disorder prediction 252 277 - -
Lan9g0847 324 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Lan9g0847 324 Pfam Myb-like DNA-binding domain 22 73 IPR001005 -
Lan9g0847 324 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 321 - -
Lan9g0847 324 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 321 IPR044848 GO:0003700
Lan9g0847 324 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Lan9g0847 324 MobiDBLite consensus disorder prediction 212 234 - -
Lan9g0847 324 MobiDBLite consensus disorder prediction 255 269 - -
Lan9g0847 324 Gene3D - 19 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0847 Lan-Chr9 14255621 14257562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0847 13 281 G2-like Transcription Factor Family AT1G69580 49.827 2.07e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan9g0847 Myb_DNA-binding 1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0847 - - gmx:100787178 449.899