Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0836 ATGGACTTGTCTCCAAACAACACCCACACCTTAGACAAAGATACTCAAACCCCACCACCAACCCAACCCAACAACACCAAGTCTTCATCTTTCACCAATGGTTCCTTCAAGCCCTACTACCCCACCACCACCACCACCTCCACCTCCTCCACCCCACCACCACCACCACCTTCCACGGTGCTAATTTCCTACAATGAGTGCCTGAAAAACCATGCTGCCAACATAGGCGGCCACGCCCTTGATGGCTGCGGCGAGTTCATGCCTTCCTCTTCCTCCAACCCCTCTGAACCCCGCTCACTAACATGTGCAGCGTGTGGCTGCCACCGCAACTTCCACCGCCGTGACAACAACCCCAGATTCCCCAGCTTCTACCACTCATCACCGCCACTACCTCGCCGTGGACTTAGCCTCAGAAGCAGCAGCCCTAGTAGCCTCAGCCCAAGCCCAATATCTTCAAGCCCTTCTTCTCCACCACCAATCTCTCATCATTTTCCAACCTCTTATGCAGTACCCCACATGCTCTTATCACGTGGAAATGGATATTGTGATGATCAACATAGGGGTTTCAGTTTCTTCAACTATTCTTCAGAGAACAAGAACCAAAGTGGGAAAAAGAAGAGGTGTAGAACCAAGTTCAGCCAAGAGCAGAAGGAGAAGATGCATAGTTTATGTGAGAAGTTGGGTTGGAGAATGAACAAAGAGGATGAAGGGTTGATCCAGGAATTTTGCAATGAAGTTGGTATTCCCAGAGGGGTCTTCAAGGTATGGATGCACAACAATAAGAATATTTTCAAGAAGAGATCATTAGAAATGTTAGGAAATGCTGTTAGTGATGAAAAGATCAATGGAAATCATAATGGCAATGGTGATGATAGTGATGAAATTAACAATTCCTTAGAACACAACTAA 909 0.4719 MDLSPNNTHTLDKDTQTPPPTQPNNTKSSSFTNGSFKPYYPTTTTTSTSSTPPPPPPSTVLISYNECLKNHAANIGGHALDGCGEFMPSSSSNPSEPRSLTCAACGCHRNFHRRDNNPRFPSFYHSSPPLPRRGLSLRSSSPSSLSPSPISSSPSSPPPISHHFPTSYAVPHMLLSRGNGYCDDQHRGFSFFNYSSENKNQSGKKKRCRTKFSQEQKEKMHSLCEKLGWRMNKEDEGLIQEFCNEVGIPRGVFKVWMHNNKNIFKKRSLEMLGNAVSDEKINGNHNGNGDDSDEINNSLEHN* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0836 302 Pfam ZF-HD protein dimerisation region 62 116 IPR006456 -
Lan9g0836 302 MobiDBLite consensus disorder prediction 1 47 - -
Lan9g0836 302 Gene3D - 192 265 - -
Lan9g0836 302 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 9 25 267 - -
Lan9g0836 302 MobiDBLite consensus disorder prediction 280 302 - -
Lan9g0836 302 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 205 262 IPR006455 -
Lan9g0836 302 MobiDBLite consensus disorder prediction 133 150 - -
Lan9g0836 302 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 64 115 IPR006456 -
Lan9g0836 302 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 64 115 IPR006456 -
Lan9g0836 302 MobiDBLite consensus disorder prediction 116 163 - -
Lan9g0836 302 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 25 267 - -
Lan9g0836 302 SUPERFAMILY Homeodomain-like 195 266 IPR009057 -
Lan9g0836 302 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0836 Lan-Chr9 14148828 14150127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0836 62 261 ZF-HD Transcription Factor Family AT1G69600 51.000 6.60e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lan9g0836 ZF-HD_dimer 6.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0836 - - lang:109355848 517.309