Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0829 ATGGAATTGGAAGCTGGTCGTCAAAATGGGATCCGAAGCAGACCCAATTTCCCTCTTCAGCTCTTAGAGAAAAAAGATGTTGATGATGTTTCATCAGAACAACCATGTTCCACCACTGCACACGACGGTGGAGGTGATGTTGCCGACACCAATAGCTGCCTCAACTTTGGTGAGCAATCTAAGAAGCCGCCTCCGAAGCGAGCTTCAACTAAGGACAGGCATACCAAGGTAGACGGCCGTGGCCGCCGGATCCGCATGCCGGCAGCTTGCGCCGCCAGGGTATTCCAGCTGACGCGGGAGCTCGGTCACAAATCTGATGGGGAGACAATCGAGTGGCTCCTCCAGCAGGCGGAGCCGGCAGTTATCGCCGCCACCGGCACAGGTACCATCCCCGCCAACTTCACCTCGCTCAACATCTCCCTCCGCAGCTCCGGCTCCACCATGTCGGCACCGTCTCACTACTTTCGGGGAAACTACTTCAACCCTAGCACGTTCTCGTCAACCGCCGCCACGGCTCAGTTAAGGAACCGCGGGGAATGGGAATGGAGCATGAACAACAACAAGAACATGCTCATGGAAGATTCTCGTAGGTCTACTATGTTGTTTCCTGGTTCTTCAGAGAATAGTAATTCCAATATCTCATCGCTTTTGAATTTCAACCCTAGTGTTAATGCCATGCTACAAGCAAAACAAGAAGAATCTGGTGGGGGTGGCGGTGGGGGTAGTCTTGAATTAATGGCTAGTGATTCTGATGGAAGTTTAGGTAGAAAAAGAAGGCAAGAACAACAAGAAGTGTCAAACATGGGAAGCTATATGTTACAATCCAGTACTTCGGGGTCGATTTCTGCAACCTACGCTTCTAATCCTGCAACGTTTTGGATGGTGGCGGGTAACGGTAACCAAAGCATGAATAGCAGTGGCAATGGTGGTGATCCCATTTGGGCAATTCCCTCTGTTGGTGGCAATAGTGGAATGTATAGAGGTGCCATGTCAAGTGGTGGTATTCATTTCATGAATTTTGCTTCTCCAATTCCTCTTATGCCTGGTGGTGGACAACTAGGTCCGGGGATGAGTGGTAATGGCAGCGGCGGCGGTGGTGCTGCAATGGTAAATGAAAGCAACTTAGGTATGCTTGCAGCACTTAATGCTTACAGGCAATTTCAGGCCAACGGAGTTCCGGAGTCTCCGGCGAGCACCGGGCAACATCATGGAGGAGATGATGGACATGAAACAAGCAGTCAACATTCTTGA 1251 0.5068 MELEAGRQNGIRSRPNFPLQLLEKKDVDDVSSEQPCSTTAHDGGGDVADTNSCLNFGEQSKKPPPKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSAPSHYFRGNYFNPSTFSSTAATAQLRNRGEWEWSMNNNKNMLMEDSRRSTMLFPGSSENSNSNISSLLNFNPSVNAMLQAKQEESGGGGGGGSLELMASDSDGSLGRKRRQEQQEVSNMGSYMLQSSTSGSISATYASNPATFWMVAGNGNQSMNSSGNGGDPIWAIPSVGGNSGMYRGAMSSGGIHFMNFASPIPLMPGGGQLGPGMSGNGSGGGGAAMVNESNLGMLAALNAYRQFQANGVPESPASTGQHHGGDDGHETSSQHS* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0829 416 Pfam TCP family transcription factor 69 192 IPR017887 -
Lan9g0829 416 MobiDBLite consensus disorder prediction 1 78 - -
Lan9g0829 416 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 4 416 IPR005333 GO:0003700
Lan9g0829 416 MobiDBLite consensus disorder prediction 231 265 - -
Lan9g0829 416 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 4 416 - -
Lan9g0829 416 MobiDBLite consensus disorder prediction 389 416 - -
Lan9g0829 416 ProSiteProfiles TCP domain profile. 70 124 IPR017887 -
Lan9g0829 416 MobiDBLite consensus disorder prediction 64 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0829 Lan-Chr9 13959602 13961550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0829 60 353 TCP Transcription Factor Family AT3G47620 45.858 8.01e-58 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan9g0829 TCP 6.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0829 - - gmx:100809966 522.702