Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0822 ATGCAAAATATGAAGAAGAATCAGCAGAAACAGGTGTTAGATTCTGAAGAATCTAAGAAGAAGGAGCGTCACATTGTGACATGGACTCAAGAGGAGGATGATATATTGAGGGAGCAGATTGGTATACATGGAACTGAAAATTGGGCAATTATTGCTTCTAAATTCAAGGACAAAACGACACGACAGTGCCGAAGAAGATGGTACACTTATTTGAATTCTGATTTCAAGAAAGGAGGATGGTCGCCGGAGGAAGACATGCTCTTATGCGAGGCGCAAAAGATATTTGGTAACCGGTGGACTGAAATTGCAAAGGTGGTTTCAGGCAGAACGGATAATGCGGTGAAAAACCGTTTCGCCACATTGTGCAAAAAGAGAGCTAAATGTGAAGCCTTAGCGAAAGAGAACAACACTTCATACATCAATTCAAATAATAAGAGAGTAATTTTACATGAGTATAATACATATGGGGTATCCAAATCAGCCGTAGCTAATAAGATGAGGAGATCCCATATCCCGGATGATGGAGCCGAAAAGATCAGCTTCGGTGACAGATCACATAAACAAGATGGAACTCCGACATATCAGCAGGGAAGAGCACCATTTGCAGTATTACCTCAAAACACTCATAATGTGAACAACTTGCCGGATCAGCGCCATGTCTGCAATGTGAAGTTTAGTAGTTATGCCCAAAACAACAAGAATCAAGGAACATTCCTTAAAAAGGATGACCCGAAGATTAGCGTATTGATGCAACAAGCAGAATTACTCAGTTCACTAGCTCTAAAAGTTGATGCAAAGAACATGGATCAAAGTCTTGAAAACACATGGAAGGTTCTTCAAGATTTTCTGAATCAAACTAAAGAATCAGACAGTCCAAGATATAAGATTCCAGATTTACAGCTTGTAGATCTTAAAGATTTGTTGGAGGACTTAAGGAGTAGTAGAGAGGGAATCCAACCATGTTTGAGGCAAATGGAACTGTGTGAAGACTCTCTAGGCAGTTCTGAACACAGTACAGAATCAACTTTTCTGCCTAATTCATGTTGTGAGAATTTGGAACACTCTATACATCAAGATATTGAACTGAAGTCTATTCAAAATGGAGACCAAGGAGGAGTTAGAGGATGTGATCAAGGGGTCTTTTCTAGTGCAACAATGAATCAAGATATATTTCCATCATGTAAGGAGCCGATAAACAATGATGGCATTGCTTCTGCCTTATCAAGTGCAGAGTTCAGTTCCCCTCTTCAAGTTACCCCTATGTTCAGATCCTTAACTGCAGGAATTCCTAGCCCACATTTTTCAGAAAGTGAAAGGAGCTTCCTTATGAAAACACTTGGAATGGAGTCTCCATCCCTCAACCTAAGTGCCAACACCTCACAACCACCACTCTGCAAAAGAACCCTACTACATAGTTTATATTAA 1425 0.4007 MQNMKKNQQKQVLDSEESKKKERHIVTWTQEEDDILREQIGIHGTENWAIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFATLCKKRAKCEALAKENNTSYINSNNKRVILHEYNTYGVSKSAVANKMRRSHIPDDGAEKISFGDRSHKQDGTPTYQQGRAPFAVLPQNTHNVNNLPDQRHVCNVKFSSYAQNNKNQGTFLKKDDPKISVLMQQAELLSSLALKVDAKNMDQSLENTWKVLQDFLNQTKESDSPRYKIPDLQLVDLKDLLEDLRSSREGIQPCLRQMELCEDSLGSSEHSTESTFLPNSCCENLEHSIHQDIELKSIQNGDQGGVRGCDQGVFSSATMNQDIFPSCKEPINNDGIASALSSAEFSSPLQVTPMFRSLTAGIPSPHFSESERSFLMKTLGMESPSLNLSANTSQPPLCKRTLLHSLY* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0822 474 ProSiteProfiles Myb-like domain profile. 72 122 IPR001005 -
Lan9g0822 474 Gene3D - 16 76 - -
Lan9g0822 474 PANTHER TRANSCRIPTION FACTOR MYB88 10 470 - -
Lan9g0822 474 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 75 IPR017930 -
Lan9g0822 474 ProSiteProfiles Myb-like domain profile. 28 71 IPR001005 -
Lan9g0822 474 CDD SANT 80 121 IPR001005 -
Lan9g0822 474 PANTHER MYB PROTEIN-RELATED 10 470 - -
Lan9g0822 474 SMART sant 76 124 IPR001005 -
Lan9g0822 474 SMART sant 24 73 IPR001005 -
Lan9g0822 474 Gene3D - 79 150 - -
Lan9g0822 474 SUPERFAMILY Homeodomain-like 24 118 IPR009057 -
Lan9g0822 474 Pfam Myb-like DNA-binding domain 28 88 - -
Lan9g0822 474 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 126 IPR017930 -
Lan9g0822 474 CDD SANT 27 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0822 Lan-Chr9 13767345 13773090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0822 12 323 MYB Transcription Factor Family AT2G02820 62.893 1.09e-133 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan9g0822 Myb_DNA-bind_6 8.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0822 K09422 - gmx:100807667 736.102