Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0813 ATGTTGCAGCCACATTCTTGTTCTGCTACAACACAATCTTCCATTACCATCCCAAACCACACTTTCACTCCAAAGTTCATTCCTTTAAGTCGTGTTTCTTCTATGCCCACTTTCTCCGTTACCCTCCAACCACTCTCTATCAGATGCCGCCACTCTCACCTCGATGAACCTAAATCATTTCCCTCTTCTCCACAAGCTCAACGCTATTCACCACCACCACCATCAGCATCACCAGCTTCAGTTGGAGCTTTACCACCTAGGGTTTTTGTGGGGCACTCAATTTACAAAGGGAAGGCTGCACTCACTGTCTCTCCTAAATCTCCGGAATTTCAATCATTGGAATCCGGGGCATTCAAAGTATCTAAGGAAGGTTCTGTGCTACTTCAGTTTGCTCCTGCAGTTGGTTCGCGCCAATATGATTGGAACCGAAAACAGGTGTTCTCGCTATCAGTGACTGAATTGGGAACTCTAATCAGCCTTGGTGCAAGGGAGTCTTTTGAATTTTTTCATGATCCTAATCAGGGGAGAAGTGATGAAGGTAAAGTTCGAAAAGTTTTGAAGGTGGAGCCACTCATGGATGGTTCTGGTCACTTATTTAACCTCAATGTTCAAAACAAGCTTGATAACATCGACGAAAACATCTTCATTCCTATTACAAAGGCAGAGTTGGCGGTTCTCAGCTCACTTTTCAACTTTATCATGCCATACCTTCTAGGTTGGCATACCTTTGGAAACTCCATAAAGCCAGATAATTCCAGCAAAGTGAATAGTGACAATCCAAGATATGGAGGAGACTATGAATGGAACAGATAG 813 0.4354 MLQPHSCSATTQSSITIPNHTFTPKFIPLSRVSSMPTFSVTLQPLSIRCRHSHLDEPKSFPSSPQAQRYSPPPPSASPASVGALPPRVFVGHSIYKGKAALTVSPKSPEFQSLESGAFKVSKEGSVLLQFAPAVGSRQYDWNRKQVFSLSVTELGTLISLGARESFEFFHDPNQGRSDEGKVRKVLKVEPLMDGSGHLFNLNVQNKLDNIDENIFIPITKAELAVLSSLFNFIMPYLLGWHTFGNSIKPDNSSKVNSDNPRYGGDYEWNR* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0813 270 MobiDBLite consensus disorder prediction 249 270 - -
Lan9g0813 270 Pfam Whirly transcription factor 94 228 IPR013742 GO:0003697|GO:0006355|GO:0006952
Lan9g0813 270 SUPERFAMILY ssDNA-binding transcriptional regulator domain 86 270 IPR009044 GO:0003677|GO:0006355
Lan9g0813 270 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC 37 270 - -
Lan9g0813 270 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 37 270 IPR013742 GO:0003697|GO:0006355|GO:0006952
Lan9g0813 270 MobiDBLite consensus disorder prediction 53 80 - -
Lan9g0813 270 MobiDBLite consensus disorder prediction 66 80 - -
Lan9g0813 270 Gene3D Transcriptional Coactivator Pc4; Chain A 79 252 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0813 Lan-Chr9 13632812 13635723 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0813 41 270 Whirly Transcription Factor Family AT1G14410 63.913 3.08e-107 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Lan9g0813 Whirly 2.1e-58 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0813 - - lang:109355868 511.531