Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0810 ATGGAGTTGGGTGGTGGTAAGAATGGATTGAATGTTACTAAGGTGGTGGAGTCTTGGGATGTGAGTAAATCAAAGGGGAGGAAGAAGAAGAAGAAGAAAGAGGATGAGGTAAAGGTACTGGTGGAAGAAAAGGAAGATACTAGGTGGTGGGTTAAGCTAATGTTATTTGGGAGCTGCATTTCTTCAAGATCCAAGGTTGATAGCTCAATCTGTGGCACCAGTAATCATTATGCTGAAAGTAAATCAACTAATGATACAAGCAGAGGCCAACCAATAGTTCCTGTAGTGTCTTCTACATCCACTAGTAATACAGAAAGCAATTCATCGAGTTCAAAATTTGAGGAGGAGATGAAAGTTGCTTCCAGGCTGCGAAAGTTCGCTTTCAATGATCTTAAGTTGGCAACGAGAAATTTCCGGCCTGAGAGTCTTCTTGGTGAAGGTGGGTTTGGTTGTGTATTCAAGGGGTGGATAGAAGAAAATGGAACTGCTCCAGTAAAACCTGGAACTGGGCTAACTGTTGCGGTAAAAACCCTCAACCATGATGGGCTCCAGGGTCATAAAGAGTGGCTGGCTGAAGTAAATTTTCTCGGTGATCTAGTTCATCCAAACCTTGTTAAGCTTGTCGGATACTGCATTGAAGATGATCAAAGGTTGTTAGTGTATGAGTTCATGCCTCGTGGAAGCCTTGAAAACCACTTGTTTAGGAGATCCTTGCCTCTTCCATGGCCCATTAGGATGAAAATTGCACTTGGAGCTGCTAAGGGTCTTGCTTTCCTTCATGAAGAAGCTGAGCGGCTAGTAATATATAGAGATTTTAAAACTTCAAATATACTATTAGATGCAGAGTACAATGCCAAGCTCTCAGACTTTGGCCTTGCCAAAGATGGTCCAGAAGGTGATAATACACATGTGTCGACTCGAGTGATGGGAACCTATGGATACGCAGCACCAGAATATGTCATGACAGGACATCTTACATCAAAAAGTGACGTGTACAGTTTTGGAGTGGTACTGCTTGAGATGTTGACAGGCAGAAGATCTATGGACAAAAGTCGACCCAATGGTGAACACAACCTTGTGGAATGGGCTCGACAACATATAGGAGAGAGGAGAAGGTTCTACAAATTGATCGACCCTCGCTTGGAAGGTCACTTTTCCATAAAAGGAGCTCAGAAAGCTGCACAACTGGCTGCTCACTGCCTTCGTAGAGATCCAAAAGCCAGACCATTAATGAGTGAAGTTGTTGAAGCTTTAAAGCCTCTCCCAAACCTTAAGGACATGGCAAGCTCTTCTTATTATTTCCAGACGATGCAAGCAGACCGCTTCCGAGCGAGCCCGAATACTAGAAACAGGCAGACACAAGGAGGAGCATTGCTTACCCGGAATGGGCAGCAGAAAAGGAGCCTTTCAATACCAAATGGCACTCATGCCTCTCCATATCATCATCAGTATCCTCAACAATCACCAAAACCCGATGTCAAAGCATAG 1488 0.4395 MELGGGKNGLNVTKVVESWDVSKSKGRKKKKKKEDEVKVLVEEKEDTRWWVKLMLFGSCISSRSKVDSSICGTSNHYAESKSTNDTSRGQPIVPVVSSTSTSNTESNSSSSKFEEEMKVASRLRKFAFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWPIRMKIALGAAKGLAFLHEEAERLVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDNTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKSRPNGEHNLVEWARQHIGERRRFYKLIDPRLEGHFSIKGAQKAAQLAAHCLRRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFRASPNTRNRQTQGGALLTRNGQQKRSLSIPNGTHASPYHHQYPQQSPKPDVKA* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0810 495 PANTHER OS01G0588500 PROTEIN-RELATED 68 485 - -
Lan9g0810 495 ProSitePatterns Protein kinases ATP-binding region signature. 144 176 IPR017441 GO:0005524
Lan9g0810 495 ProSiteProfiles Protein kinase domain profile. 138 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0810 495 SUPERFAMILY Protein kinase-like (PK-like) 124 442 IPR011009 -
Lan9g0810 495 Gene3D Phosphorylase Kinase; domain 1 97 223 - -
Lan9g0810 495 MobiDBLite consensus disorder prediction 65 114 - -
Lan9g0810 495 MobiDBLite consensus disorder prediction 442 495 - -
Lan9g0810 495 MobiDBLite consensus disorder prediction 442 485 - -
Lan9g0810 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Lan9g0810 495 MobiDBLite consensus disorder prediction 65 110 - -
Lan9g0810 495 Pfam Protein tyrosine and serine/threonine kinase 142 418 IPR001245 GO:0004672|GO:0006468
Lan9g0810 495 CDD STKc_IRAK 144 421 - -
Lan9g0810 495 MobiDBLite consensus disorder prediction 14 34 - -
Lan9g0810 495 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 68 485 - -
Lan9g0810 495 Gene3D Transferase(Phosphotransferase) domain 1 224 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0810 Lan-Chr9 13576964 13580500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0810 107 418 Glycoside Hydrolase AT3G07070 55.205 1.71e-114 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan9g0810 PK_Tyr_Ser-Thr 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0810 - - gmx:100807510 813.913