Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0799 ATGGGTGTTAGTGATTACTACAAGATACTAAAGGTGAACCATGATGCCACAGATGAAGAACTGAAGAAGGCTTTTAAGAAGTTAGCAATGAAATGGCACCCTGATAAGAATTATGATCATCATAAAAAGGAAGATTTTGAGGCCAAGTTCAAGCAAATTTCTGAGGCTTATGATGTTCTTAGTGACCCAAAGAAGCGCCAGATCTATGATTTTTATGGTCACTACCCTCTTAATTCTCATAGGTATAATAAGGAAAATGGTGATGGCAATGTTAAGGATCATGAGAAAAAAGGGGTGGTTGAGAGTAGTTTGGGATGTACCCTTGAGGAGCTTTACAAAGGTTGCAAAAGGAGGTTGAGGATCTCAAGGATTGTCCCTGATGAACTTGATAATTTAACATCTATAGAAGAAATCTTGAAGATTGATATTCAACCTGGTTGGAAGAAGGGAACAAAAATAACTTTTCCCGGGAAAGGCAACCAAGAAAATGGAGCTGCTCCTGCCGATCTAATTTTTGTGTTGGATGAAAAACCACATGCTCTTTTCAAGAGAGATGGAAATGATTTGGTAACGACTCAGAAGATATTACTTGTTGATGCTCTCACCGGAGGAAAGACTCTCAATTTGAAAACACTGGATGGAAGAGACCTCACAGTCCAAGTGACTGAAATTGTGAAACCAGGCTCTGAGCTAGTGGTCCCTAATGAAGGTATGCCTATTTCAAAAGAACCCGGCAAGAAAGGAAATCTTAGAATCAAGTTCAATGTTATGTTTCCATCGAGGTTGACCACACAACAGAAGTATGAACTAAAAAAGATTCTGGAGTGA 828 0.3901 MGVSDYYKILKVNHDATDEELKKAFKKLAMKWHPDKNYDHHKKEDFEAKFKQISEAYDVLSDPKKRQIYDFYGHYPLNSHRYNKENGDGNVKDHEKKGVVESSLGCTLEELYKGCKRRLRISRIVPDELDNLTSIEEILKIDIQPGWKKGTKITFPGKGNQENGAAPADLIFVLDEKPHALFKRDGNDLVTTQKILLVDALTGGKTLNLKTLDGRDLTVQVTEIVKPGSELVVPNEGMPISKEPGKKGNLRIKFNVMFPSRLTTQQKYELKKILE* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0799 275 SUPERFAMILY Chaperone J-domain 2 80 IPR036869 -
Lan9g0799 275 ProSiteProfiles dnaJ domain profile. 5 73 IPR001623 -
Lan9g0799 275 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 274 - -
Lan9g0799 275 Gene3D - 98 177 - -
Lan9g0799 275 CDD DnaJ_C 100 262 - -
Lan9g0799 275 Pfam DnaJ domain 5 70 IPR001623 -
Lan9g0799 275 Gene3D DnaJ domain 1 93 IPR036869 -
Lan9g0799 275 SUPERFAMILY HSP40/DnaJ peptide-binding domain 102 179 IPR008971 GO:0006457|GO:0051082
Lan9g0799 275 ProSitePatterns Nt-dnaJ domain signature. 50 69 IPR018253 -
Lan9g0799 275 Gene3D - 179 260 - -
Lan9g0799 275 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 274 - -
Lan9g0799 275 CDD DnaJ 5 62 IPR001623 -
Lan9g0799 275 SUPERFAMILY HSP40/DnaJ peptide-binding domain 182 267 IPR008971 GO:0006457|GO:0051082
Lan9g0799 275 SMART dnaj_3 4 65 IPR001623 -
Lan9g0799 275 PRINTS DnaJ domain signature 7 25 IPR001623 -
Lan9g0799 275 PRINTS DnaJ domain signature 25 40 IPR001623 -
Lan9g0799 275 PRINTS DnaJ domain signature 45 65 IPR001623 -
Lan9g0799 275 PRINTS DnaJ domain signature 65 84 IPR001623 -
Lan9g0799 275 Pfam DnaJ C terminal domain 101 259 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0799 Lan-Chr9 13304226 13306482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0799 6 72 C2H2 Transcription Factor Family AT1G74250 33.333 2.02e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0799 K09510 - gmx:100778440 437.573