Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0798 ATGGCGGTGGAGAAGAGCTTGCTTCTCCTGTGTAGTAGTCGACTCCTCAACTCTGGTGTATTTATTGATCTTTTGATGACAAACTTGCAGGAAGGTGAAGCTGTAGCCGCTTCTGAAGAAGCTAAGAAAAGCAACCATGTCCAGAGGAAAATTGAGAAGCGCCAGAAGGATCGTCAACTTGACTCCCACATTGAAGAGCAGTTTGGTGGCGGTCGATTGCTTGCCTCTATTTCTTCTCGCCCAGGTCAATGCGGCAGGGCTGATGGGTATATTTTGGAAGGTAAGGAGTTGGAGTTTTACCTGAAGAAACTGCAGAAGAAGAAGGGCAAGGGTGCTGCCTAA 342 0.4766 MAVEKSLLLLCSSRLLNSGVFIDLLMTNLQEGEAVAASEEAKKSNHVQRKIEKRQKDRQLDSHIEEQFGGGRLLASISSRPGQCGRADGYILEGKELEFYLKKLQKKKGKGAA* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0798 113 Pfam Ribosomal protein S8e 60 92 IPR022309 -
Lan9g0798 113 MobiDBLite consensus disorder prediction 37 59 - -
Lan9g0798 113 PANTHER 40S RIBOSOMAL PROTEIN S8 31 113 - -
Lan9g0798 113 Gene3D - 16 108 - -
Lan9g0798 113 PANTHER 40S RIBOSOMAL PROTEIN S8 31 113 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0798 Lan-Chr9 13291466 13293122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0798 30 101 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 76.389 3.11e-34 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0798 K02995 - gmx:100794937 127.872