Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0789 ATGGTTTCAATGGAATATTTCAATGAAATCTCTGCTTCAACCCTTTCTTCTTTAGGATCCTCAAATACCCTTATGAGTGTGATCCTTGGATTGCCATTATTGGAACTTGTTTCAATCTTCACAAACTTGAGTTTCCTTCTTATTTTTCTCTTTGTTGTCTTTTTAAGGAAGGTGCATTTGAGTGTAAGCACTGCTAGATATAGTAAGGACAATAGGGGCAATAATGCCAGCCAAATTAGTCATAGTTTTGATGCTGAAATGCGCGAATTTCGAATTAGTACATGGTTCAAGTTGTCTTTGTTGTCTTGTTTCTATGTTCTCTTGGTGCAAGTTTTGTCGTTGGGGTTTGATGGTGTTACTTTGATTAAGGGGAAGAGGAAAACTGTGGATTTGTGTCTTCTTTCTGTGCCGGGTTTTCAGTGTTTAGCTTGGTTGGTATTGAGCTTCTCAGCTTTGCATTGCAAATTCAATGTGTCTGAGAAGTTTCCAATTTTGTTGAGAGGTTGGTGGATTGTGTCGTTTGTTATTTGCTTGTGTATTTCATATGTTGACGGGAGAGGGTTTTGGGAAGAAGGTTCTAAGCATGTAGGTTCGCACGTTGTGGCGAATTTCGCTGTCACTCCTGCTTTAGCTTTCTTGTGTATTGTTGCAATTCGGGGTGTTACTGGTATAGAAGTTTGTAGGAATTCCGAGATTCATGAACCGTTGCTTGTTGAAGAAGAACCGGGTTGTCTCAAGGTTACTCCTTATAGTGACGCTGGACTTTTCAGCTTGGCCACTTTGTCTTGGCTGAACCCTCTTCTTTCCATTGGCGCAAAGAGGCCACTCGATCTTAAGGACATTCCACTTGTTGCACAAAAAGATAGGTCTAAGACCAATTATAAGATTTTGAACTCAAATTGGGAGAGATTGAAGGCCGAAAATCCATTGAAGCCACCTTCATTGGCGTGGGCACTTCTGAAATCATTTTGGAAAGAGGCGGCATTTAATGCAATCTTTGCAGGCTTGAATACTCTTGTCTCATATGTAGGTCCATACATGATAAGTTACTTCGTTGATTACTTGGGTGGTAAAGAGATTTTCCCTAATGAAGGGTATGTTCTTGCGGGAATTTTCTTTGTTGCGAAGCTTGTGGAGACATTCACAACTCGGCAGTGGTATCTAGGAGTGGATATCTTAGGCATGCATGTTAGATCAGCTCTAACGGCAATGGTGTATCGAAAGGGGCTAAGACTCTCGAGCCTGGCAAAGCAAAGTCACACGAGTGGTGAGATCGTTAACTACATGGCTGTAGATGTTCAAAGGGTAGGCGACTATTCTTGGTACCTTCATGACATGTGGATGCTTCCTATGCAGATTGTTCTCGCCCTCGCAATTTTGTATAAGAATGTCGGTATTGCTTCTATTGCGACACTCATTGCCACAATCATTTCCATTGTTGTCACTATTCCTATAGCGAGGGTCCAAGAGGATTACCAAGACAAATTAATGGCTGCCAAGGATGAAAGGATGAGAAAAACATCCGAGTGCTTGAGGAATATGAGGATTCTCAAGCTGCAAGCTTGGGAAGAAAGATATCGAATTAAATTGGAAGAAATGCGCGGAGTGGAGTTCAAGTGGCTAAGGAAAGCCCTCTATTCTCAGGCGTTCATAACTTTCATATTCTGGAGTTCTCCGATATTTGTTTCAGCTGTCACTTTCGCTACTTCCATATTGCTCGGTGGCCAGTTAACTGCAGGTGGCGTTCTTTCGGCTCTAGCTACTTTTCGTATCCTGCAAGAACCTTTGAGGAATTTTCCGGATTTGGTGTCAACTATGGCTCAGACAAAAGTTTCTCTTGATCGAATATCATGTTTCCTGCTGGAGGAAGAGTTGCCGGAAGATGCAACTCTTAACTTGCCGCATGGTATTTCTAATATTGCTGTAGAGATTAAGGATGGTGTCTTCTGCTGGGACCCTTCTTCTTCTAGGCCTACTTTGTCAGGGATACACATCAAAGTTGAAAGAGGAATGCGTGTGGCGATTTGTGGTATGGTTGGTTCTGGGAAATCGAGTTTTCTTTCTTGCATCCTCGGAGAGATTCCTAAGCTTTCTGGTGAAGTAAGAGTGTGCGGCTCTTCTGCATATGTATCCCAATCAGCGTGGATACAGTCAGGAAATATAGAAGAAAATATTCTCTTCGGAAGTCCAATGGACAAAGCAAAGTACAAGAATGTTCTTCATGCTTGTTCATTGAAAAAGGACCTCGAACTTTTCTCGCATGGTGATCAAACAATTATCGGTGATAGAGGTATTAACCTGAGTGGTGGACAGAAGCAGCGAGTTCAGCTTGCACGAGCACTCTACCAAGATGCTGATATTTATCTCCTCGATGACCCCTTTAGTGCCGTTGATGCCCACACTGGATCAGAACTGTTTCGGGAGTATATATTGACAGGACTAGCGGATAAAACTGTCATTTTCGTGACACATCAAGTTGAATTTCTTCCTGCTGCTGATATGATTCTGGTTCTTAAAGAAGGCCGCATTATACAAGCAGGAAAGTACGACGATCTCTTGCAAGCAGGAACGGATTTCAAAACTCTAGTTTCAGCTCATCATGAAGCAATAGAGGCTATGGATATTCCTACTCACTCCTCCGAAGATTCGGATGAAAATTTATGCTTGGATACATGTGATGAGTCCAGAAAGAAATCAATTTCTTCATCAAATGATATTGAATGTTTGGCGAAAGAAGTGCAAGAGGGTTCATCAGCTTCAGATCAAAAAGCAAATAAGGACAAGAAGAGAGCAAAACGGTCGAGAAAAAAACAGCTTGTGCAAGAAGAGGAGAGAGTTAGAGGTAGAGTGAGCATGAAGGTGTATTGGTCATACATGGCAGCAGCATATAAAGGGTTATTGATTCCACTCATAATCATAGCACAATCATTATTTCAATTTCTTCAGATTGCTAGTAATTGGTGGATGGCTTGGGCTAACCCTCAAACTGAAGGAGACCAGCCAAAAGTAACTCCCGCAATTCTTCTTCTTGTTTACATGGCCCTTGCATTTGGAAGCTCGTTGTTTATACTTGTAAGGGCTGTTCTAGTTGCTACGTTTGGCCTCGCAGCTGCTCAGAAGCTATTTCTGAAGATGCTTACTAGCGTTTTCCATGCACCGATGTCTTTCTTTGACTCCACGCCAGCCGGAAGGATCTTGAATAGGGTATCAGTTGATCAAAGTGTCGTGGATCTTGACATTCCCTTTAGACTTGGTGGCTTTGCTTCAACAACAATACAACTAATTGGTATTGTCGGCGTCATGACAGAAGTTACATGGCAAGTTTGGCTCCTTGTTATCCCAATGGCTGTTGCTTGTTTGTGGATGCAGAAATACTACATGTCTTCCTCAAGGGAACTTGTCCGAATCGTAAGCATCCAGAAGTCACCAATTATAAATCTTTTTGGCGAATCAATTGCTGGAGCATCCACCATCAGAGGTTTCGGACAAGAAAAACGGTTCGTGAAGAGGAACCTATATCTTCTTGATTGTTTTGCAAGACCATTTTTCTGCAGTCTTGCAGCCATCGAGTGGCTGTGCCTGCGGATGGAGTTATTGTCAACCTTCGTATTTGCCTTCTGCATGGTATTGCTCGTAAGCTTTCCCCAAGGAAGTATTGACCCTAGCATGGCTGGACTTGCTGTGACATATGGCCTTAACTTAAATGCTCGGTTATCACGGTGGATACTTAGCTTTTGCAAACTTGAGAATAAGATTATATCTATTGAAAGAATTTATCAGTACAGTCAAATTCCTAGTGAAGCACCAGCGGTTATTGAAGATTCTCGCCCTCCATCTTCATGGCCTGAAAACGGGACAATCCAAATAATTGATTTGAAGGTACGTTACAAGGAGAATCTTCCGATGGTGCTTCATGGAGTATCATGCACATTTCCTGGAGGGAAGAAGATTGGAATAGTCGGACGAACGGGCAGTGGCAAATCCACTTTGATTCAGGCATTATTTCGATTGATTGAACCCTCAAGTGGAAGTATCCTTATAGACAACATTAATATTTCGGATATCGGTCTTCATGACCTTAGAATCCATCTTAGTATCATACCCCAAGATCCAACTTTATTTGAAGGAACCATTAGAGGAAATCTTGATCCTCTTGAAGATCACTCAGATAAAGATATTTGGGAGGCACTAGATAAGTCTCAGCTCGGAGAGATTATCCGCGAGAAAGGGCAACAGCTCGATACACCAGTTCTAGAAAACGGAGATAATTGGAGTGTCGGACAGCGACAACTTGTTTCTCTAGGCCGAGCTCTACTGAAGCAGTCAAAAATACTTGTACTTGATGAAGCAACAGCATCGGTTGATACTGCCACTGATAATCTGATCCAGAAGATTATTCGGAATGAGTTTAGAGACTGCACAGTGTGCACCATTGCACATCGCATTCCTACTGTTATCGATAGCGATCTAGTTCTGGTTCTCAGCGATGGTAGAGTTGCAGAGTTCGACACTCCTTCAAGACTATTAGAGGATAAGTCATCCATGTTTTTGAAGTTGGTGACCGAGTATTCGTCACGGTCAAGTGGTATACCAGAATTCTAA 4602 0.4224 MVSMEYFNEISASTLSSLGSSNTLMSVILGLPLLELVSIFTNLSFLLIFLFVVFLRKVHLSVSTARYSKDNRGNNASQISHSFDAEMREFRISTWFKLSLLSCFYVLLVQVLSLGFDGVTLIKGKRKTVDLCLLSVPGFQCLAWLVLSFSALHCKFNVSEKFPILLRGWWIVSFVICLCISYVDGRGFWEEGSKHVGSHVVANFAVTPALAFLCIVAIRGVTGIEVCRNSEIHEPLLVEEEPGCLKVTPYSDAGLFSLATLSWLNPLLSIGAKRPLDLKDIPLVAQKDRSKTNYKILNSNWERLKAENPLKPPSLAWALLKSFWKEAAFNAIFAGLNTLVSYVGPYMISYFVDYLGGKEIFPNEGYVLAGIFFVAKLVETFTTRQWYLGVDILGMHVRSALTAMVYRKGLRLSSLAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDMWMLPMQIVLALAILYKNVGIASIATLIATIISIVVTIPIARVQEDYQDKLMAAKDERMRKTSECLRNMRILKLQAWEERYRIKLEEMRGVEFKWLRKALYSQAFITFIFWSSPIFVSAVTFATSILLGGQLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRISCFLLEEELPEDATLNLPHGISNIAVEIKDGVFCWDPSSSRPTLSGIHIKVERGMRVAICGMVGSGKSSFLSCILGEIPKLSGEVRVCGSSAYVSQSAWIQSGNIEENILFGSPMDKAKYKNVLHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFREYILTGLADKTVIFVTHQVEFLPAADMILVLKEGRIIQAGKYDDLLQAGTDFKTLVSAHHEAIEAMDIPTHSSEDSDENLCLDTCDESRKKSISSSNDIECLAKEVQEGSSASDQKANKDKKRAKRSRKKQLVQEEERVRGRVSMKVYWSYMAAAYKGLLIPLIIIAQSLFQFLQIASNWWMAWANPQTEGDQPKVTPAILLLVYMALAFGSSLFILVRAVLVATFGLAAAQKLFLKMLTSVFHAPMSFFDSTPAGRILNRVSVDQSVVDLDIPFRLGGFASTTIQLIGIVGVMTEVTWQVWLLVIPMAVACLWMQKYYMSSSRELVRIVSIQKSPIINLFGESIAGASTIRGFGQEKRFVKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPQGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPAVIEDSRPPSSWPENGTIQIIDLKVRYKENLPMVLHGVSCTFPGGKKIGIVGRTGSGKSTLIQALFRLIEPSSGSILIDNINISDIGLHDLRIHLSIIPQDPTLFEGTIRGNLDPLEDHSDKDIWEALDKSQLGEIIREKGQQLDTPVLENGDNWSVGQRQLVSLGRALLKQSKILVLDEATASVDTATDNLIQKIIRNEFRDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPSRLLEDKSSMFLKLVTEYSSRSSGIPEF* 1534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0789 1533 CDD ABCC_MRP_domain1 642 842 - -
Lan9g0789 1533 CDD ABC_6TM_ABCC_D1 329 616 IPR044746 GO:0140359
Lan9g0789 1533 SMART AAA_5 669 850 IPR003593 -
Lan9g0789 1533 SMART AAA_5 1313 1498 IPR003593 -
Lan9g0789 1533 Pfam ABC transporter transmembrane region 331 596 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan9g0789 1533 Pfam ABC transporter transmembrane region 971 1212 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan9g0789 1533 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1287 1521 IPR003439 GO:0005524
Lan9g0789 1533 CDD ABCC_MRP_domain2 1285 1505 - -
Lan9g0789 1533 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 642 865 IPR003439 GO:0005524
Lan9g0789 1533 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 80 1533 - -
Lan9g0789 1533 MobiDBLite consensus disorder prediction 917 940 - -
Lan9g0789 1533 Gene3D - 1270 1523 IPR027417 -
Lan9g0789 1533 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1278 1517 IPR027417 -
Lan9g0789 1533 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 80 1533 - -
Lan9g0789 1533 ProSitePatterns ABC transporters family signature. 767 781 IPR017871 GO:0005524
Lan9g0789 1533 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 970 1240 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan9g0789 1533 Gene3D ABC transporter type 1, transmembrane domain 298 624 IPR036640 GO:0005524|GO:0016021
Lan9g0789 1533 Gene3D ABC transporter type 1, transmembrane domain 929 1268 IPR036640 GO:0005524|GO:0016021
Lan9g0789 1533 Gene3D - 625 884 IPR027417 -
Lan9g0789 1533 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 639 864 IPR027417 -
Lan9g0789 1533 SUPERFAMILY ABC transporter transmembrane region 316 627 IPR036640 GO:0005524|GO:0016021
Lan9g0789 1533 CDD ABC_6TM_ABCC_D2 968 1262 IPR044726 GO:0140359
Lan9g0789 1533 Pfam ABC transporter 1304 1452 IPR003439 GO:0005524
Lan9g0789 1533 Pfam ABC transporter 660 794 IPR003439 GO:0005524
Lan9g0789 1533 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 331 608 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan9g0789 1533 SUPERFAMILY ABC transporter transmembrane region 956 1267 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0789 Lan-Chr9 13099415 13107248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0789 642 858 Calmodulin-binding Proteins AT2G36910 30.508 2.76e-19 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0789 - - gmx:100790550 2599.7