Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0778 ATGAGTTTTGGAGGATTTTTAGACAACAACTTTGGTGGTGGTGGTGCAAGAAACTTATCAGATATTTCACATAGCAACGGTACCATCACCAATCAAAACAACAACAATAGAATAATGCCCTCTGGTGCAATCTCACACCATCGCATTATGACTCCAACTTTGGCCAAACCCATGTTCAACTCTCCTGGTTTATCTCTAGCACTTCAAACTAATATTGATGGGCAAGGAGAACATGTGAATAGATCAATGGGTGAGAATAATAATAATTTTGAGGTGAATGGTTTGAGAAGGAGCAGAGAAGAAGAACATGAAAGCAGATCTGGTAGTGATAACATGGATGGTGCTTCTGGTGATGATGAACAAGATGCTGCCGACAACCCTCCAAGAAAAAAACGTTATCACCGACACACTCCACAGCAAATACAAGAACTTGAATCTTTGTTTAAGGAGTGTCCTCACCCTGATGAGAAGCAAAGGCTAGAACTAAGCAAAAGGCTATGCTTGGAAACAAGGCAAGTGAAGTTTTGGTTCCAAAATCGGAGAACCCAAATGAAGACACAATTGGAGCGCCATGAGAACTTGCTGCTTAGGCAAGAGAATGATAAGCTTAGAGCTGAGAACATGTCAATTAGAGAAGCTATGAGGAATCCAATGTGTTCAAATTGTGGGGGACCAGCTATTATTGGTGACATTTCAGTAGAGGAACAACATCTTTGGATTGAGAATGCTCGGCTCAAGGACGAGTTAGACCGAGTTTGCGCGCTCGCTGGCAAGTTCTTAGGCCGACCCCTTTCCTCAATGACAAACTCAATTGCTCCTCAATTGCCAAATTCAAGTTTGGAGCTTGGAGTTGGAAGCAATGGTAATGGATTTGGTGGAATGAGCAATGTGTCTTCAACATTGCCTTTGGGGTCTTCTGATTTTGGAATCGGAGGTATGTCTAGCCCTTTAGCCATGGTGTCTCATTCCACTAGACCAACGGGTTCAATGGCCACTGGTTTCGATAGATCGATGGAGAGGTCTATGTTTTTAGAGCTTGCTTTATCTGCAATGGATGAGTTGGTGAAAATGGCACAGACTAATGAGCCTCTTTGGATAAAGAGTTTAGAAGGGGAAAGAGAAATTATGAACCATGAGGAATATTTGAGGACTTTCACTCCTTGCATTGGCCTCAGATCCAATGGTTTTGTCTATGAAGCTTCTAGAGAAACTGGAATGGTTATCATAAACAGTTTGGCCCTTGTTGAGACTCTAATGGATGCGAATCGATGGGCAGAGATGTTTTCTTCTATGATTGCTACAACCTCTACCACTGAAGTAATATCAAATGGAATAAATGGAACAAGAAATGGGGCACTTCAACTAATGCATGCGGAGCTTCAAGTACTTTCACCTTTAGTTCCGGTTCGTGAGGTGAATTTCCTCCGATTTTGTAAGCAACATGCCGAAGGTGTGTGGGCTGTGGTGGATGTGTCTGTAGATACCATCAGAGAAATTTCTGGTGCACATAATTTTGTGAACTGTAGAAGACTACCTTCTGGTTGTGTGGTGCAAGATATGCCTAATGGTTACTCCAAGGTGACATGGGTGGAGCATGCAGAATATGAGGAAAGCCAAGTTCACCAGCTCTACAGACCCTTGTTGAGCTCAGGCATGGGCTTCGGCGCCGAACGGTGGGTCGCCACCCTCCAACGCCAATGTGAATGCCTCGCCATCCTAATGTCCTCGGCCGCACCCTCTCGGGACCACTCAGCAATAACCGGTGGTGGAAGGAGAAGCATGCTGAAGCTAGCACAACGCATGACCAAAAACTTCTGTGCTGGGGTATGCGCCTCAACAGTGCACAAATGGAACAAACTGAACCCGGGGAATGTAGACGAGGACGTGAGGGTGATGACGCGTAAGAGCGTGGATGATCCAGGTGAACCACCGGGTGTTGTGTTGAGCGCAGCCACTTCTGTGTGGCTTCCAGTTTCACCAAAGAGAGTCTTCGATTTCTTACGTGATGAGCGGCTTAGAAGCGAGTGGGATATACTCTCCAACGGTGGTCCCATGCAGGAGATGGCTCACATTGCTAAAGGCCAAGACCATGGCAACTGCGTCTCTCTCCTAAGAGCTAGCGCCATGAATTCGAACCAGAGTAGCATGCTGATACTCCAGGAGACATGCATAGACGCAGCTGGGTCGCTTGTGGTGTACGCGCCGGTAGATATCCCGGCCATGCACGTGGTCATGAACGGCGGTGACTCAGCTTACGTGGCGTTGCTTCCATCGGGGTTTGCAATTGTCCCTGATGGGCCTGGGTCACGTGGGACACAGAATGGTGGAGCCACCACAAACAGTGGCAACAATGGTGATGAGGCGCGTGTAAGTGGTTCCCTTCTAACGGTGGCGTTTCAAATCCTTGTGAATAGTCTCCCTACAGCAAAACTCACCGTAGAGTCCGTGGAAACGGTAAACAACTTAATCTCATGCACCGTCCAGAAGATCAAAGCCGCGCTTCATTGA 2508 0.4669 MSFGGFLDNNFGGGGARNLSDISHSNGTITNQNNNNRIMPSGAISHHRIMTPTLAKPMFNSPGLSLALQTNIDGQGEHVNRSMGENNNNFEVNGLRRSREEEHESRSGSDNMDGASGDDEQDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENLLLRQENDKLRAENMSIREAMRNPMCSNCGGPAIIGDISVEEQHLWIENARLKDELDRVCALAGKFLGRPLSSMTNSIAPQLPNSSLELGVGSNGNGFGGMSNVSSTLPLGSSDFGIGGMSSPLAMVSHSTRPTGSMATGFDRSMERSMFLELALSAMDELVKMAQTNEPLWIKSLEGEREIMNHEEYLRTFTPCIGLRSNGFVYEASRETGMVIINSLALVETLMDANRWAEMFSSMIATTSTTEVISNGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSVDTIREISGAHNFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYEESQVHQLYRPLLSSGMGFGAERWVATLQRQCECLAILMSSAAPSRDHSAITGGGRRSMLKLAQRMTKNFCAGVCASTVHKWNKLNPGNVDEDVRVMTRKSVDDPGEPPGVVLSAATSVWLPVSPKRVFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNSNQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGTQNGGATTNSGNNGDEARVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALH* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0778 835 ProSiteProfiles START domain profile. 336 572 IPR002913 GO:0008289
Lan9g0778 835 SUPERFAMILY Bet v1-like 597 831 - -
Lan9g0778 835 MobiDBLite consensus disorder prediction 94 109 - -
Lan9g0778 835 Gene3D - 116 202 - -
Lan9g0778 835 SMART START_1 345 569 IPR002913 GO:0008289
Lan9g0778 835 MobiDBLite consensus disorder prediction 76 137 - -
Lan9g0778 835 SMART HOX_1 128 191 IPR001356 GO:0003677
Lan9g0778 835 ProSitePatterns 'Homeobox' domain signature. 162 185 IPR017970 GO:0000981|GO:0006355
Lan9g0778 835 SUPERFAMILY Homeodomain-like 115 187 IPR009057 -
Lan9g0778 835 Pfam START domain 345 569 IPR002913 GO:0008289
Lan9g0778 835 MobiDBLite consensus disorder prediction 766 786 - -
Lan9g0778 835 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 84 834 - -
Lan9g0778 835 CDD homeodomain 129 187 IPR001356 GO:0003677
Lan9g0778 835 CDD START_ArGLABRA2_like 340 568 - -
Lan9g0778 835 MobiDBLite consensus disorder prediction 76 93 - -
Lan9g0778 835 Coils Coil 181 216 - -
Lan9g0778 835 MobiDBLite consensus disorder prediction 771 786 - -
Lan9g0778 835 Pfam Homeodomain 130 185 IPR001356 GO:0003677
Lan9g0778 835 SUPERFAMILY Bet v1-like 337 569 - -
Lan9g0778 835 Gene3D - 392 566 IPR023393 -
Lan9g0778 835 ProSiteProfiles 'Homeobox' domain profile. 127 187 IPR001356 GO:0003677
Lan9g0778 835 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 84 834 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0778 Lan-Chr9 12790716 12798159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0778 1 835 Homeobox Transcription Factor Family AT3G61150 63.225 0.0 1034
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lan9g0778 START 4.6e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0778 K09338 - qsu:111991611 1319.29