Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0744 ATGTTACATTTACTTTCCTTCCTTTTTCTTCTATGCAACTCTCTTGTTGCACCTGTTACCCCTCTCAACATTGAAGGCTCTGTGCTTTTAACACTGAAAAATTCCATAACCAAAGATCCAGAAGGGTCTATGAGTAATTGGAACTCTTCTGATGAAAATCCATGTTCATGGAATGGAGTCACATGCAAGGACCAGAGTGTTGTTTCCATTAGTATTCCAATGAAGAAACTTTATGGGTTTCTACCTTCTGCTCTAGGATCTCTGTCTCAGCTTCGCCATGTAAATTTCAGAAACAATAATCTCTTTGGGAATTTGCCTAGTGAGCTTTTTGAAGTTCAGGGACTGCAAAGTTTGGTGCTTTATGGAAATTCCTTATCTGGGTATGTTCCAAATGAGATTGGGAAGCTCAGGTACCTTCAAACTCTAGATTTATCACAAAATTTCTTTAATGGGTCTTTGCCTGCTACACTTGTTCAATGCAAGAGGCTTAAAGCACTTGTTCTGAGTCATAATAATTTTAGTGGTACTTTACCAGATGATGGATTTGGTAGTAAATTACTTTCCTTGGAAAAACTTGATCTTTCTTTCAATCAGTTAAATGGTTCAATTCCTAGTGATATTGGAAATTTGTCAAGTTTGCAAGGAACTGTTGATTTGTCTCATAATCATTTTAGTGGTTCAATCCCACCAAGCTTTGGTAATTTGCCTGAGAAAGTTTACATTGATCTCTCTTACAATAGTTTGAGTGGTCCAATACCCTTAATTGGAGCTTTAATGAATAGAGGGCCAACTGCTTTTATTGGTAATTCTGGTCTCTGTGGCCCTCCTTTGAAGAATCCATGTGCATTGGATTCTCCAGGTTCTGCAAGTTCACCTTCCTCATTTCCATTTTTGCCTGGTAATTACCCATCTCAAGGTAACGGTTCGGGGAAGAATGAGAAAAATAAAGGGCTAAGTAAGGGTGCTGTGGTTGCCATTATTGTTGGTGATGTAATTGGGATTTGCATTTTGGGTTTGTTGTTCTCTTACTTTTACTCAAGGGTTTGTGGTTTTAATCAGGATGGGGATGAGGGTGGTATCGAGAAGGAAGCCGGAGTGAGGGAAAAGTGCTTATGTTTCAGAAAGGGTGAATCTGAGACCCTATCTGATCATGTTGAGCAATATGATCTTGTCCCATTGGATACTCAAGTGGCTTTTGATTTGGATGAGCTTCTTAAGGCTTCAGCTTTTGTTCTAGGAAAGAGTGGAATTGGGATTGTCTACCGGGTTGTGCTCGAAGATGGGCTTACTTTGGCTGTGAGAAGATTGGGGGAGGGAGGTTCTCAAAGGTTTAAAGAGTTCCAAACTGAAATTGAAGCAATAGGAAAGCTAAGGCATCCTAATATTGTTACTTTGAGAGCTTATTACTGGTCCGTTGATGAGAAGCTTCTCATCTATGATTATATTCCCAATGGAAGCCTCGATACGGCAATTCATGGGAAAGCTGGACTTGTCACATTTACGCCATTATCTTGGTCCGATCGGATGAAAATCATGAAAGGAATTGCAAAAGGGTTGGTGTACCTGCATGAGTTTAGCCCCAAAAAATATGTCCATGGAGACCTGAAGCCAAGTAAGATACTACTAGGCCATAACATGGAACCCCACATTTCTGATTTTGGTCTTGGACGCCTTGCAAATATCGCTGGAGGAGGTTCTCCAACCTTGCAATCGAACCGAGTGGCTGCAGAGAAACCACAAGAAAAACAAAATAGCTTATCCGCAGAAGTCACCAGCACAGCTAACATTTTGGGCAATGGTTATCAGGCTCCAGAGACACTGAAAGTGGTTAAGCCATCACAAAACTGGGATGTGTATTCATATGGTGTGATCTTGCTAGAAATGACCACGGGACGTTTGCCAATTATCCAACTCGGTAACTCGGAAATGGACCTTGTTCAATGGATTCAGTTCTGCATTGATGATAAGAAGCCACTTTCGGATGTGTTAGACCCATATTTAGCAGACGACTTGGATAGGGAAGACGAGATTATTGCAGTTTTAAAGATTGCAATTGCTTGTGTCAATAGCAGCCCGGAAAAGAGACCGATAATGAGGCATGTGCTTGATGTTTTGGATAGAGTGTCCTTGTCCACTGACTAA 2142 0.4085 MLHLLSFLFLLCNSLVAPVTPLNIEGSVLLTLKNSITKDPEGSMSNWNSSDENPCSWNGVTCKDQSVVSISIPMKKLYGFLPSALGSLSQLRHVNFRNNNLFGNLPSELFEVQGLQSLVLYGNSLSGYVPNEIGKLRYLQTLDLSQNFFNGSLPATLVQCKRLKALVLSHNNFSGTLPDDGFGSKLLSLEKLDLSFNQLNGSIPSDIGNLSSLQGTVDLSHNHFSGSIPPSFGNLPEKVYIDLSYNSLSGPIPLIGALMNRGPTAFIGNSGLCGPPLKNPCALDSPGSASSPSSFPFLPGNYPSQGNGSGKNEKNKGLSKGAVVAIIVGDVIGICILGLLFSYFYSRVCGFNQDGDEGGIEKEAGVREKCLCFRKGESETLSDHVEQYDLVPLDTQVAFDLDELLKASAFVLGKSGIGIVYRVVLEDGLTLAVRRLGEGGSQRFKEFQTEIEAIGKLRHPNIVTLRAYYWSVDEKLLIYDYIPNGSLDTAIHGKAGLVTFTPLSWSDRMKIMKGIAKGLVYLHEFSPKKYVHGDLKPSKILLGHNMEPHISDFGLGRLANIAGGGSPTLQSNRVAAEKPQEKQNSLSAEVTSTANILGNGYQAPETLKVVKPSQNWDVYSYGVILLEMTTGRLPIIQLGNSEMDLVQWIQFCIDDKKPLSDVLDPYLADDLDREDEIIAVLKIAIACVNSSPEKRPIMRHVLDVLDRVSLSTD* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0744 713 SMART LRR_typ_2 88 112 IPR003591 -
Lan9g0744 713 SMART LRR_typ_2 136 160 IPR003591 -
Lan9g0744 713 SMART LRR_typ_2 186 210 IPR003591 -
Lan9g0744 713 SUPERFAMILY Protein kinase-like (PK-like) 411 705 IPR011009 -
Lan9g0744 713 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 712 - -
Lan9g0744 713 ProSiteProfiles Protein kinase domain profile. 406 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0744 713 Pfam Leucine Rich Repeat 188 210 IPR001611 GO:0005515
Lan9g0744 713 Gene3D Ribonuclease Inhibitor 183 283 IPR032675 -
Lan9g0744 713 Gene3D Ribonuclease Inhibitor 22 182 IPR032675 -
Lan9g0744 713 Pfam Leucine rich repeat 90 147 IPR001611 GO:0005515
Lan9g0744 713 Gene3D Transferase(Phosphotransferase) domain 1 482 712 - -
Lan9g0744 713 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Lan9g0744 713 MobiDBLite consensus disorder prediction 292 314 - -
Lan9g0744 713 CDD STKc_IRAK 412 707 - -
Lan9g0744 713 Gene3D Phosphorylase Kinase; domain 1 377 481 - -
Lan9g0744 713 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 4 712 - -
Lan9g0744 713 SUPERFAMILY L domain-like 26 278 - -
Lan9g0744 713 Pfam Protein kinase domain 412 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0744 Lan-Chr9 11978234 11980815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0744 4 713 Receptor kinase-like Gene Family AT2G01210 67.083 0.0 976
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan9g0744 Pkinase 2.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0744 - - gmx:100810225 1104.35