Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0727 ATGGAAATAGATTCTTCTACTACCAAGTTGAAGAGTGTTGGGCCAGGAATGGATTTGCCTATCATGCATGATAGTGATAGGTTTGAGCTTGTCCGTGATATTGGGTCTGGAAATTTTGGAGTTGCAAGGCTCATGAGGGATAAGCACACTGAGGAGCTTGTTGCTGTTAAGTATATTGAGAGAGGTGATAAGATAGATGAAAATGTACAGAGGGAAATTATAAATCACAGATCACTGAGGCATCCCAATATTGTCAGGTTCAAGGAGGTCATATTAACGCCTACACATTTGGCTATCGTGATGGAATATGCTTCTGGAGGAGAGCTATTTGAGCGAATATGCAATGCAGGGAGGTTCGGTGAGGATGAGGCACGCTTCTTCTTCCAACAACTTATATCAGGGGTTAGCTACTGTCATGCAATGCAAGTATGTCACCGTGATCTGAAGTTGGAGAACACATTGCTAGATGGTAGTCCAGCTCCTCGTTTGAAGATTTGTGATTTTGGGTATTCGAAGTCCTCAGTGCTACATTCACAACCAAAATCTACAGTTGGTACCCCTGCATACATTGCTCCTGAAGTTCTCCTTAAGAAAGAATACGATGGCAAGATTGCCGACGTGTGGTCTTGTGGAGTCACCTTATATGTCATGTTGGTTGGAGCCTATCCTTTTGAGGATCCCGAAGAACCTAAAAATTTCCGGAAGACAATTCATAGGATTTTGAAAGTCCAGTACTCAATTCCTGACTATGTTCATATATCTCCCGAGTGTCGTCATCTGATCTCAAGGATATTTGTTGCTGACCCTTCGAAGAGAATAAATATTCCTGAGATCAGAAATCATGAGTGGTTTTTGAAGAACCTTCCGGTTGATCTCATGGTTGAGAATACAATGAACGACCAGTTTGAGGAGCCGGATCAACCAATGCAGAGCATTGAAGAAATCATGCAGATAATTAGTGAGGCCACAATTCCTGCAGCCGGAACTCAGTCGTCTCTTCACCAGTATCTCACTGGCAGCTTGGATATTGATGATGACATGGACGAGGACCTAGAGACCGATCCTGACCTCGATATTGATAGCAGTGGAGAAATAGTTTATGCGCTGTAA 1110 0.4297 MEIDSSTTKLKSVGPGMDLPIMHDSDRFELVRDIGSGNFGVARLMRDKHTEELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFGEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILKVQYSIPDYVHISPECRHLISRIFVADPSKRINIPEIRNHEWFLKNLPVDLMVENTMNDQFEEPDQPMQSIEEIMQIISEATIPAAGTQSSLHQYLTGSLDIDDDMDEDLETDPDLDIDSSGEIVYAL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0727 369 Pfam Protein kinase domain 28 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0727 369 ProSiteProfiles Protein kinase domain profile. 28 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0727 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Lan9g0727 369 CDD STKc_SnRK2-3 27 283 - -
Lan9g0727 369 SMART serkin_6 28 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0727 369 SUPERFAMILY Protein kinase-like (PK-like) 19 328 IPR011009 -
Lan9g0727 369 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2E 18 364 - -
Lan9g0727 369 Gene3D Phosphorylase Kinase; domain 1 9 103 - -
Lan9g0727 369 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
Lan9g0727 369 PANTHER SERINE/THREONINE KINASE 18 364 - -
Lan9g0727 369 Gene3D Transferase(Phosphotransferase) domain 1 104 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0727 Lan-Chr9 11389635 11393469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0727 27 295 CBL-interacting serine-threonine protein kinases AT5G25110 43.816 3.25e-69 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lan9g0727 Pkinase 3.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0727 K14498 - gmx:100804702 664.84