Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0715 ATGTCATTTTCCGATGCAGCTTCCGTATTCATGGACGTACCAATAACCGCCTCCGTCTTCGGAATTCGTCTTCGGATACTCATCACTGTCATTCTCATCTCCTTTATCGTCCTCGTCCTCTTTCTCATCACCTTCTGCTTCATCTGTATCCGCAACCGCAACCGTAACAATGTGCCCTCGGGCTCAACAGAAATAGAAGAATTAGGCCTGGAAACGGGGTCGAAGGTGTCGCATGTTGGGTTGGGGAGGTGGTATACGTTGAGGGAGCTTCAAGTTGCGACTGATTGGTTGTCTGAATCGAATGTGATTGGTAAAGGTGGTTATGGAATTGTCTATCGTGGTATTCTTCCTGATGGGACTAAAGTTGCTGTTAAAAATCTCTTTAATAAGCCAGAAGCTGAGAGAGATTTTAAAGCAGAGGTAGAAGTAATTGGTCGTGTGCGGCACAAGAATCTCGTTAGGTTGCTTGGATACTGTGTTGAGGGGCCATACATGATGCTTGTGTATGAATATGTTGACAATGGTAGTCTTGATCAATGGCTGCATGAGAACGTTGCATCCATAAGCCCTTTGACATGGGATATTCGCATGAACATTATGTTGGGCACAGCAAAAGGATTGGCTTATCTTCATGAGGGTCTTGAACAAAAAGTCATTCACCGGGATGTGAAATCGAGCAACGTACTCCTCGATAGCGAATGGAACGCTAAGGTTTCGGATTTTGGGCTTGTTAAGCTTATGTGTTCTGACCATAGTTATGTCGCAACTCGAGTGTTGGGGACATTTGGTTATGTTGCCCCAGAGTATGCTTCCACTGGAATGTTGAATGAGAAGAGTGATGTTTATAGCTTTGGGATGCTTATCATGGAAATAATCACTGGGAAAAGTCCTGTTGATTATAGCAGACCAAAGAGACAGATTAATTTAATAGAGTGGTTGAAAACTCAGTTTGGGGATAAAAAAACTGAGGAAGTAGTTGATTCTAAGCTCCCTGAGAAGCCATCTCTGGAGGCTCTTAAACGTGCTCTAATGGTTGCTATTAGATGTGTTGATCCTGATCCGACAAAGAGGCCTAAAATGGGAAATGTGGTCCACTTGCTTGAGGCTGATGACCTCTTATTCCTTAATAGAGGAAGAGTCGATGTGGAATATTCTAGTTCCGATGTTGATTCTGAACAGGAGCATGGAGACTCAAGTTTAGATAAAAAGCCGATAAGTGGAGAGATCACTGATCAAAGGGAGGATAATAGTGATAGTAATTATCAACAGAAGCATAAGGACTCAAGTTTAGATAAAAAATTAAAAGGTAAAGAGATCATTGATCAAAAGAAAGATAATAGTGATGGTGATTATCAACAGGAGCGTAAGGACTCAAGTTTATATAAAAAGCCAAAAGGTGGAGAGATCACTGATCAAAAGAAAGATAATAGTGATGATAATTATCAACAAGAGCATAAGGACTCAAGTTTACATAAAAAACCAATAGGTAGAGAGATCACTGATCAAAGGAAACATGATAGTGGTGGTGATTATCAAAAGGGGCATAAGGACTCAAGTTTATATAAAAAGTCAATAGGTGCATAG 1584 0.4097 MSFSDAASVFMDVPITASVFGIRLRILITVILISFIVLVLFLITFCFICIRNRNRNNVPSGSTEIEELGLETGSKVSHVGLGRWYTLRELQVATDWLSESNVIGKGGYGIVYRGILPDGTKVAVKNLFNKPEAERDFKAEVEVIGRVRHKNLVRLLGYCVEGPYMMLVYEYVDNGSLDQWLHENVASISPLTWDIRMNIMLGTAKGLAYLHEGLEQKVIHRDVKSSNVLLDSEWNAKVSDFGLVKLMCSDHSYVATRVLGTFGYVAPEYASTGMLNEKSDVYSFGMLIMEIITGKSPVDYSRPKRQINLIEWLKTQFGDKKTEEVVDSKLPEKPSLEALKRALMVAIRCVDPDPTKRPKMGNVVHLLEADDLLFLNRGRVDVEYSSSDVDSEQEHGDSSLDKKPISGEITDQREDNSDSNYQQKHKDSSLDKKLKGKEIIDQKKDNSDGDYQQERKDSSLYKKPKGGEITDQKKDNSDDNYQQEHKDSSLHKKPIGREITDQRKHDSGGDYQKGHKDSSLYKKSIGA* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0715 527 ProSiteProfiles Protein kinase domain profile. 97 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0715 527 MobiDBLite consensus disorder prediction 384 527 - -
Lan9g0715 527 PANTHER OS03G0125600 PROTEIN 65 396 - -
Lan9g0715 527 SMART serkin_6 97 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0715 527 Gene3D Transferase(Phosphotransferase) domain 1 172 375 - -
Lan9g0715 527 ProSitePatterns Protein kinases ATP-binding region signature. 103 125 IPR017441 GO:0005524
Lan9g0715 527 MobiDBLite consensus disorder prediction 384 520 - -
Lan9g0715 527 PANTHER OS01G0323000 PROTEIN 65 396 - -
Lan9g0715 527 CDD STKc_IRAK 103 368 - -
Lan9g0715 527 Pfam Protein kinase domain 99 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0715 527 SUPERFAMILY Protein kinase-like (PK-like) 76 368 IPR011009 -
Lan9g0715 527 Gene3D Phosphorylase Kinase; domain 1 71 171 - -
Lan9g0715 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0715 Lan-Chr9 11077931 11082020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0715 27 407 Receptor kinase-like Gene Family AT4G02010 41.604 1.79e-90 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lan9g0715 Pkinase 8.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0715 - - lang:109356070 992.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0715 9 11077931 11082020 Lan2g0162 2 1371589 1374605 LSH
Lan2g0162 2 1371589 1374605 Lan9g0715 9 11077931 11082020 PCT
Lan9g0715 9 11077931 11082020 Lan2g0162 2 1371589 1374605 PCT