Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0712 ATGTCTGTTGTTGATTCAACTGAAAATAACATCAAAGGAATACCCACTTATGGTGGACGCTATGTTCAGTACAATATCTATGGAAACCTTTTTGAAGTTTCTAGAAAATATGTCCCTCCAATTCGACCAGTTGGTAGAGGTGCTAATGGTATTGTTTGTGCTGCTGTAAATGCCGAGACAAGTGAGGAAGTTGCCATTAAGAAGATTGGCAATGCATTTGACAACAGAATAGATGCCAAAAGGACCTTACGAGAAATAAAACTTCTTCGGCACATGGATCATGAAAATGTGATGTCAATTAATGATATTATACGACCTCCACAGATGGAGAATTTCAATGACGTGTATATTGTTTCTGAGTTAATGGACACGGATCTGCATCAAATAATACGTTCCAATCAATCATTGACTGATGATCATTGTCGGTATTTTTTGTATCAGTTGTTACGGGGGCTCAAATATGTACATTCAGCAAATGTTTTGCACCGTGATCTAAAGCCTAGCAATTTGCTACTGAATGCCAACTGTGACCTGAAGATTGCAGACTTCGGTCTTGCTAGAACAACATCTGAAACTGATTTTATGACTGAGTATGTCGTTACTCGGTGGTACCGAGCTCCAGAATTGCTTCTTAATTGTTCAGAGTATACGTCAGCCATCGATATATGGTCTGTCGGTTGCATACTTGGTGAAATCATGACAAGACAACCCCTCTTTCCTGGCAAAGATTATGTTCATCAACTAAGACTGGTCACAGAGCTGATAGGTTCACCTGACGACACCAGCCTTGGATTTCTACGAAGTGATAATGCTCGTCGGTATGTAAGACAGCTTCCACAATATCAAAAGCAAAACTTCTCTTCTAGATTTCCCAACATGTCTCCAGATGCTGTTGATTTGTTAGAGAAGATGCTTATCTTTGATCCAAAAAGGCGGATTACAGTTGAGGAGGCTTTGTGTCACTCATACATGGCACCACTCCATGATACCAATGATGAACCTGTTTGCCCCAGAACCTTCAATTTTGACTTTGCACGACCATCATTCACCGAAGAAGATATCAAGGAACTCATCTGGAGAGAGTCTGTGAAGTTCAATCCTGATCCACCAATTTACTGA 1119 0.403 MSVVDSTENNIKGIPTYGGRYVQYNIYGNLFEVSRKYVPPIRPVGRGANGIVCAAVNAETSEEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENVMSINDIIRPPQMENFNDVYIVSELMDTDLHQIIRSNQSLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIADFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLVTELIGSPDDTSLGFLRSDNARRYVRQLPQYQKQNFSSRFPNMSPDAVDLLEKMLIFDPKRRITVEEALCHSYMAPLHDTNDEPVCPRTFNFDFARPSFTEEDIKELIWRESVKFNPDPPIY* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0712 372 Gene3D Transferase(Phosphotransferase) domain 1 122 351 - -
Lan9g0712 372 CDD STKc_TEY_MAPK 31 367 - -
Lan9g0712 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Lan9g0712 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 14 371 - -
Lan9g0712 372 SMART serkin_6 38 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0712 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 14 371 - -
Lan9g0712 372 ProSitePatterns MAP kinase signature. 73 176 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lan9g0712 372 ProSitePatterns Protein kinases ATP-binding region signature. 44 68 IPR017441 GO:0005524
Lan9g0712 372 Gene3D Phosphorylase Kinase; domain 1 21 361 - -
Lan9g0712 372 ProSiteProfiles Protein kinase domain profile. 38 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0712 372 Pfam Protein kinase domain 42 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0712 372 SUPERFAMILY Protein kinase-like (PK-like) 41 332 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0712 Lan-Chr9 10979249 10985700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0712 8 367 MAP Kinase Gene Family AT4G01370 84.444 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lan9g0712 Pkinase 6.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0712 K20600 - gmx:100786554 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0957 11 9825846 9833873 Lan9g0712 9 10979249 10985700 LSH