Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0688 ATGAGCGTGGTCGGATTAGATTTTGGTAATGAAAGCTGCATTGTTGCGGTTGCGAGGCAGAGGGGCATTGATGTTGTTCTCAATGATGAGTCCAAGCGTGAAACCCCTGCTATTGTATGCTTTGGTGACAAGCAACGCTTCATCGGCACTGCTGGGGCTGCTACCACTATGATGAACCCCAAGAATTCCATCTCACAGATTAAGAGGCTAATTGGCAAACAATTTTCTGATCCCGAATTGCAGCGGGATATCAAGTCATTGCCCTTTCATGTTACTGAAGGCCCTGATGGATATCCATTGATTCATGCACGCTACTTGGGTGAAGCTAAAACATTTACCCCAACACAAGTGTTCGGAATGATGTTGTCAAATCTTAAAGAAATCGCCGAGAAAAATCTCAATGCTGCTGTTGTTGATTGTTGCATTGGAATCCCAGTTTATTTTACTGATCTTGAGAGGAGGGCAGTCTTGGATGCTGCCACGATTGCTGGTTTGCGCCCACTTCACCTCATTCACGAAACTACGGCGACTGCCTTGGCCTATGGGATTTACAAGACAGATCTTCATGAAACTGATCAGCTGAATGTTGCCTTTGTGGACATTGGACATGCAAGCATGCAAGTGTGCATTGCTGGATTCAAAAAGGGGCAGCTTAAAATACTAGCTCATTCATATGATCGGTCTTTGGGTGGAAGGGATTTTGACGAGGTTTTGTTCAATTACTTTGCTGCAAAATTTAAGGAGGAGTACAAGATTGATGTTTTCCAGAATGCCAGGGCTTCTCTAAGGCTCAGAGCTGCTTGTGAGAAGCTAAAGAAGGTGCTTAGTGCAAATCCTGAGGCACCTCTGAACATCGAGTGCTTAATGGATGAGAAGGATGTCAGGAGCTTCATCAAACGTGATGACTTTGAGCAACTAAGTCTTCCAATTCTGGAACGTGTGAAGGGACCTTTGGAGAAGGCACTTGCTGAAGCAGGCCTTACGGTTGAAGATGTACACATGGTTGAGATTGTTGGTTCAGGTTCTCGTGTACCAGCTATAAATAAAATATTGACAGAGTTTTTCAAAAAGGACCCTAGGCGGACAATGAATGCTAGTGAATGCGTTGCCAGGGGTTGCGCCTTGCAGTGTGCAATTCTTAGTCCAACATTTAGAGTACGAGAATTTCAGGTCAACGAAAGCCTACCTTTCTCTATTTCTCTTTCATGGAAAGGTTCTGGTCCGGATGCACAAAATAGTGGATCAGATAATCAGCTGAGTACAGTTGTTTTCCCCAAAGGCAATCCCATACCAAGTATCAAGGCACTGACATTCTACAGGTCAGGAACATTTTCTGTTGATGTACAATATGGTGATGCGAGTGGGCTGCAAGCTTCTAAGATTAGCACATATACTATTGGTCCTTTCCAAAGCACAAAAAGTGAAAGGGCAAAGGTTAAGGTTAAAGTTCGATTGAATCTGCATGGAATCGTATCTGTGGACTTGGCAACTATGTTGGAAGAGGAAGAAGTCGAGGTGCCAGTTTCCAAAGAATCAGCTGCAGAAAATACCAAGATGGACACTGATGGAGCTCCTACAAATGCTGCTGTGCCTCCAACCTTCAATGACAGTGATGTTAACATGCAAGATGCAAAGGCCAGTGATGATACCCCCGGGGTGGAAAATGGTACCTTTGACAGTGGAGATAAGCCTGTGCAAACGGATTCTGATACCAAGGCTCCCAAGAAAAAGGTTAAGAAAACAAACATTCCAGTAGCAGAGTTAGTTTATGGAGCAATGATACCTGTGGATGTTCAGAAAGCTGTTGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGGGTGATGGAAGAAACCAAGGACAAGAAAAATGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATATGAAGAGTTTGTGACTGCTCCAGAGAAGGAAGGTTTTATTGCCAAACTTCAGGAGGTGGAAGACTGGCTATATGAGGATGGCGAAGATGAAACTAAAGGTGTATATGTTGCCAAACTTGAAGAACTAAAAAAGCAAGGTGATCCAGTTGAAGAGCGTTATAAAGAATATACGGAGAGGGGTACAGTGATTGATCAGTTCATCTATTGTATTAATAGTTACAGAGAAGCTGCATTGTCAACTGATCCCAAATTTGATCATATTGACATCAACGAGAAACAGAAGGTCTTAACTGAATGTGTTGAAGCTGAAAACTGGCTTAGGGAGAAGAAGCAGCAGCAGGACTCACTTCCAAAATATGCCAACCCTGTACTCTTGTCTGCCGATATAAGAAAGAAAGCTGAGGCTGTTGATAGGTTCTCTAAGCCGATTATGACGAAACCAAAGCCGGCCAAGCCAGTTACTCCACCAACACCAGCAACCCCACCACCTCAGGGTGGTGATGCTAATGGGAATGCTGGTGCCGCTAGTAGTGACGTCCCACCAGAATCTACTGAACCAATGGAGACTGATAAGCCAGAGAATGCTGGGTCAGTATAA 2517 0.4382 MSVVGLDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAATTMMNPKNSISQIKRLIGKQFSDPELQRDIKSLPFHVTEGPDGYPLIHARYLGEAKTFTPTQVFGMMLSNLKEIAEKNLNAAVVDCCIGIPVYFTDLERRAVLDAATIAGLRPLHLIHETTATALAYGIYKTDLHETDQLNVAFVDIGHASMQVCIAGFKKGQLKILAHSYDRSLGGRDFDEVLFNYFAAKFKEEYKIDVFQNARASLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRSFIKRDDFEQLSLPILERVKGPLEKALAEAGLTVEDVHMVEIVGSGSRVPAINKILTEFFKKDPRRTMNASECVARGCALQCAILSPTFRVREFQVNESLPFSISLSWKGSGPDAQNSGSDNQLSTVVFPKGNPIPSIKALTFYRSGTFSVDVQYGDASGLQASKISTYTIGPFQSTKSERAKVKVKVRLNLHGIVSVDLATMLEEEEVEVPVSKESAAENTKMDTDGAPTNAAVPPTFNDSDVNMQDAKASDDTPGVENGTFDSGDKPVQTDSDTKAPKKKVKKTNIPVAELVYGAMIPVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYEEFVTAPEKEGFIAKLQEVEDWLYEDGEDETKGVYVAKLEELKKQGDPVEERYKEYTERGTVIDQFIYCINSYREAALSTDPKFDHIDINEKQKVLTECVEAENWLREKKQQQDSLPKYANPVLLSADIRKKAEAVDRFSKPIMTKPKPAKPVTPPTPATPPPQGGDANGNAGAASSDVPPESTEPMETDKPENAGSV* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0688 838 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 836 - -
Lan9g0688 838 Gene3D - 5 374 - -
Lan9g0688 838 MobiDBLite consensus disorder prediction 506 576 - -
Lan9g0688 838 CDD HSPA4_like_NDB 2 381 - -
Lan9g0688 838 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 626 IPR029047 -
Lan9g0688 838 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 590 IPR029047 -
Lan9g0688 838 Gene3D - 186 360 - -
Lan9g0688 838 Gene3D Actin; Chain A, domain 4 230 313 - -
Lan9g0688 838 MobiDBLite consensus disorder prediction 519 541 - -
Lan9g0688 838 Gene3D - 595 703 IPR029048 -
Lan9g0688 838 PRINTS 70kDa heat shock protein signature 2 15 - -
Lan9g0688 838 PRINTS 70kDa heat shock protein signature 30 42 - -
Lan9g0688 838 PRINTS 70kDa heat shock protein signature 140 160 - -
Lan9g0688 838 PRINTS 70kDa heat shock protein signature 332 348 - -
Lan9g0688 838 PRINTS 70kDa heat shock protein signature 363 383 - -
Lan9g0688 838 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 715 793 IPR029048 -
Lan9g0688 838 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Lan9g0688 838 MobiDBLite consensus disorder prediction 788 803 - -
Lan9g0688 838 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Lan9g0688 838 MobiDBLite consensus disorder prediction 778 838 - -
Lan9g0688 838 Coils Coil 679 699 - -
Lan9g0688 838 PANTHER HSC70CB, ISOFORM G-RELATED 1 836 - -
Lan9g0688 838 Pfam Hsp70 protein 3 694 IPR013126 GO:0005524|GO:0140662
Lan9g0688 838 Gene3D - 38 113 - -
Lan9g0688 838 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 596 693 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0688 Lan-Chr9 10052724 10062652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0688 4 438 Calmodulin-binding Proteins AT1G16030 34.932 1.65e-85 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0688 K09489 - gmx:100778196 1358.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0568 5 11347295 11352848 Lan9g0688 9 10052724 10062652 LSH
Lan9g0688 9 10052724 10062652 Lan2g0444 2 4821993 4827666 LSH
Lan10g0241 10 1525234 1530652 Lan9g0688 9 10052724 10062652 PCT
Lan3g0180 3 1158062 1163553 Lan9g0688 9 10052724 10062652 PCT
Lan9g0688 9 10052724 10062652 Lan10g0241 10 1525234 1530652 PCT
Lan9g0688 9 10052724 10062652 Lan3g0180 3 1158062 1163553 PCT