Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0681 ATGAAGAAAGAAAGCAGTGCTGTGTTGAAAGCAGGAGAATTCCCTACTCGATTGACTCGTTCTCAAGCTGCTGCTTCTTCTCTTGTGTCTAAGCAGCTTCCCCCTTTGAAGGAGCCAGCACAACGAAATCGGAACCAACCATTACGTGCCAATCCAAAAAGAGCAGTTTCTGATACGAATAGTAAATGCCTTCAACGTAAAAAGAGGACCGTTCTTCAGGATGTTACTAATGTCTGCTGCGAAAGTTCATACAAAAGCTGTTTCCATTCGACGATAATTCAGGCTAAGAAAAGAAAGCTGCTGAAGGCTCCTCCTGTTGCTCTGAAGCTACCTCAACTTCAAGTTGGCTCCAAAGCGAAGAGTTTACCGGAAATAGGAGTTAAATCGGACAATACTATTTGCTCAACTAATTTGGAAAACAATGCACTTCTAAATCTGGATTCCAATAAGTGTGGCAAGGATGATAATCTGATTGAAAATCGGAGTTCTGGAACGTCTGCTCAGCCTTCGATTTTTAGGAACAAAGCCGAGAAAGGTAGTTTTGATGAACTTTTGATTGCATCGAAGGATCCAGTTGTCACTAACATTGACGATAATCTTGAAGATCCTCAACTATGCAGCCTCTATGTCACTGATATCTATGACAACTTGCGCGTTGCCGAGCTTACAAGAAGGCCACATCCTAACTTCATGGAAACGGTGCAGCAAGATATCACTCAAAGCATGCGCGGCATTCTCGTTGATTGGCTCGTCGAGGTTTCTGAGGAATACAAATTGGGTTTAGACACTCTTTACCTCAGTGTATATCTCATAGATTGGTTTCTCTCCAAATGTTATGTTGAAAGACAAAGACTTCAACTTCTTGGAGTCACTTGCATGCTAATTGCCTCGAAGTATGAAGAAATTAATGCCCCTCACATTGAAGATTTCTGCTTCATCACAGACAACACATACTCAAAAGCTGAGGTACTAACAATGGAGAGTCAAGTGTTAAAGTTGTCTGAATATAAACTCTTTGCTCCAACCACAATAACTTTCCTCAGGAGGTTTCTTCATGCATCACAAGCTTCTTCTTACAAGAGTCCTAACCTTGAATTGGAGTACTTAGCCAGTTACATAGCTGAACTAGCACTTATGGACTATGGTTTCTTGAACTTCCTTCCTTCTATCATTGCTGCATCAGCTGTATTTCTAGCTAGATGGACATTAGATCAATCAAACCACCCATGGAATCCTACTCTTGAACACTGTGCAAGTTATAAAGCATCAGATTTGAAAACAACAGTTCTTGCATTACAAGATCTTCAACTGAATACCAATGGCTGCCCTTTAACTGCTGTAAGGTCAAAGTACAGACAAGACAAGTTTAAATGTGTAGCAGCATTGTCTTCATCAAAATTGATTGAATCTTTGTTCTGA 1419 0.4059 MKKESSAVLKAGEFPTRLTRSQAAASSLVSKQLPPLKEPAQRNRNQPLRANPKRAVSDTNSKCLQRKKRTVLQDVTNVCCESSYKSCFHSTIIQAKKRKLLKAPPVALKLPQLQVGSKAKSLPEIGVKSDNTICSTNLENNALLNLDSNKCGKDDNLIENRSSGTSAQPSIFRNKAEKGSFDELLIASKDPVVTNIDDNLEDPQLCSLYVTDIYDNLRVAELTRRPHPNFMETVQQDITQSMRGILVDWLVEVSEEYKLGLDTLYLSVYLIDWFLSKCYVERQRLQLLGVTCMLIASKYEEINAPHIEDFCFITDNTYSKAEVLTMESQVLKLSEYKLFAPTTITFLRRFLHASQASSYKSPNLELEYLASYIAELALMDYGFLNFLPSIIAASAVFLARWTLDQSNHPWNPTLEHCASYKASDLKTTVLALQDLQLNTNGCPLTAVRSKYRQDKFKCVAALSSSKLIESLF* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0681 472 PANTHER CYCLIN-A2-4 47 472 - -
Lan9g0681 472 SMART Cyclin_C_2 341 465 IPR004367 -
Lan9g0681 472 Pfam Cyclin, N-terminal domain 212 337 IPR006671 -
Lan9g0681 472 PANTHER CYCLINS 47 472 IPR039361 -
Lan9g0681 472 SMART cyclin_7 345 434 IPR013763 -
Lan9g0681 472 SMART cyclin_7 248 332 IPR013763 -
Lan9g0681 472 MobiDBLite consensus disorder prediction 44 59 - -
Lan9g0681 472 CDD CYCLIN 242 331 IPR013763 -
Lan9g0681 472 Gene3D - 212 461 - -
Lan9g0681 472 Gene3D - 226 339 - -
Lan9g0681 472 CDD CYCLIN 341 432 IPR013763 -
Lan9g0681 472 SUPERFAMILY Cyclin-like 341 464 IPR036915 -
Lan9g0681 472 SUPERFAMILY Cyclin-like 201 335 IPR036915 -
Lan9g0681 472 MobiDBLite consensus disorder prediction 20 60 - -
Lan9g0681 472 Pfam Cyclin, C-terminal domain 341 464 IPR004367 -
Lan9g0681 472 PIRSF Cyclin_A_B_D_E 15 471 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0681 Lan-Chr9 9989806 9996210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0681 18 472 Core Cell Cycle Gene Families AT1G80370 52.268 1.62e-153 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0681 K06627 - gmx:100789757 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0681 9 9989806 9996210 Lan2g0450 2 4901729 4908897 LSH