Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0641 ATGAGTCGGGAGCAACATAAGCGAGGGAAGCAAGAGAAAGGCTCTGATGGTGCTGAGAAGGTTATTGTTGCGGTTAAGGCATCGAGGGAAATTCCAAAGACTGCTCTTGTTTGGTCTTTGACTCATGTTGTTCAACCCGGTGATTGTATTACACTGCTTGTGGTTGTGCCTTCACAAAGTTCAGGCAGAAGATTATGGGGATTTCCGAGATTTTCTGGTGACTGTGCCAGTGGCAATAAGAAGTGCCCGACCGGAACAATTTTAGAGCAGAAGAGTGATATAACGGATTGTTGCTCACAGATGATCCTTCAGCTCCATGATGTCTATGATCCAAATAAGGTTAATGTCCGGATTAAAATTGTTTCCGGATCACCTTGTGGAGCAGTGGCAGCAGAAGCCAAGAAAGTCCAAGCTAGTTGGGTCGTATTAGACAAACAGCTCAAACACGAGGAAAAGCGATGCATAGAAGAACTGCAATGTAATATTGTGGTTATGAAGCATTCCCAACCGAAAGTACTCCGCTTGAATTTGATTGGACCACAGAAGAAGGATCTCGATGAAACACATCCTTCACCATCTGATCGAGATGAGATGCGTGAAAAGAAAACCAAGAACAAGAGTGATTCTTCAAATTCTATTAAAGGACCGGTTGTCACTCCAACTAGCAGCCCAGAGCTAGGGACACCTTTCACTGCAACTGAAGCTTGTACTTCATCAGTTTCAAGCTCTGACCCGGGAACTTCACCATTCTTTATCTCCGGTATGCACAGCGAGTTAAAGAAAAAGGAAACTATCAAGGAGAATCAAGAACTCGATGATACCAATTCAGACACGGAAAGTGAAAATCTGTCGACATCTTCGGCAAGCATGAGATTCCAGCCATGGATCACAGATTTACTTTTACATCAACACAATGGAGAAAGATCGGGTATATCATCTCATGATAGGTCTAAGTTTTCAAGGCTTGATAGAGGAGCTGGAATTGAAATGTCAACGTATAGAACTGATTCGGATTTCAGCGGAAATCTAAGAGAAGCAATAGCATTATCTAGAAATGCACCACTCGGTCCACCTCCACTATGCTCAATATGTCAACACAAGGCACCTGTGTTTGGGAAACCTCCAAGGTGGTTCAGCTATGCCGAGTTGGAACTTGCTACTGGTGGATTTTCACAAGCTAATTTCTTGGCCGAAGGAGGATTTGGATCTGTCCACAGAGGGGTTCTACCGGAGGGACAAGTCATTGCTGTCAAGCAACATAAGTTGGCTAGTTCTCAGGGTGATGTTGAATTTTGCTCAGAGGTAGAAGTCCTGAGCTGCGCTCAACATCGAAATGTTGTTATGTTGATTGGGTTCTGTATAGAAGATAAAAGAAGACTACTGGTTTATGAGTACATATGCAATGGATCATTGGATTCACATTTATATGGGCGACAACGGGAACCATTAGAATGGTCTGCACGGCAAAAAATTGCTGTTGGAGCTGCTCGTGGGTTACGGTATCTTCATGAAGAGTGCAGAGTGGGTTGCATTATCCACCGTGACATGCGACCAAACAACATTCTCATAACCCATGATTTTGAACCACTGGTTGGTGATTTTGGCCTGGCAAGGTGGCAGCCTGACGGAGACACAGGTGTCGAGACCCGAGTAATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGTGGCCAAATCACTGAAAAAGCCGATGTTTATTCTTTTGGGGTGGTATTAGTCGAGCTTGTTACCGGGAGAAAAGCTGTGGATCTTAGTCGGCCCAAGGGACAGCAGTGTCTTACTGCATGGGCGCGGCCATTGTTAGAAGAATATGCCATTGAGGAGCTTATTGATCCAAGACTGAGACACCATTATTCAGAAAATGAGGTCTATTGCATGCTGCATGCTGCATCATTATGCATACGGCGGGATCCTCATTCTAGACCACGCATGTCACAGGTTCTCCGAATACTGGAGGGTGACATCATCATGGATACAGGTTACATTTCAACTCCAAGTTACGATGTAGGTAACCGGAGTGGTCGAATCTGGTTAGAGCCACATCAGAGGCAGCACCAGCATAGTGGTCCCATGTTAGAAGAGTCAATGGAATCATTCAGTGGGAAACTATCCCTTGACAAATACAGGCCTACCTATTGGGACAGGGAAAGCTATAAGGACATCATGTGA 2196 0.4467 MSREQHKRGKQEKGSDGAEKVIVAVKASREIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFSGDCASGNKKCPTGTILEQKSDITDCCSQMILQLHDVYDPNKVNVRIKIVSGSPCGAVAAEAKKVQASWVVLDKQLKHEEKRCIEELQCNIVVMKHSQPKVLRLNLIGPQKKDLDETHPSPSDRDEMREKKTKNKSDSSNSIKGPVVTPTSSPELGTPFTATEACTSSVSSSDPGTSPFFISGMHSELKKKETIKENQELDDTNSDTESENLSTSSASMRFQPWITDLLLHQHNGERSGISSHDRSKFSRLDRGAGIEMSTYRTDSDFSGNLREAIALSRNAPLGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPEGQVIAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQREPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLSRPKGQQCLTAWARPLLEEYAIEELIDPRLRHHYSENEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDIIMDTGYISTPSYDVGNRSGRIWLEPHQRQHQHSGPMLEESMESFSGKLSLDKYRPTYWDRESYKDIM* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0641 731 ProSiteProfiles Protein kinase domain profile. 390 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0641 731 MobiDBLite consensus disorder prediction 176 253 - -
Lan9g0641 731 MobiDBLite consensus disorder prediction 209 250 - -
Lan9g0641 731 PANTHER OS01G0253100 PROTEIN 16 695 IPR045271 GO:0004714|GO:0006468
Lan9g0641 731 ProSitePatterns Tyrosine protein kinases specific active-site signature. 511 523 IPR008266 GO:0004672|GO:0006468
Lan9g0641 731 SUPERFAMILY Protein kinase-like (PK-like) 374 668 IPR011009 -
Lan9g0641 731 MobiDBLite consensus disorder prediction 266 288 - -
Lan9g0641 731 Gene3D Phosphorylase Kinase; domain 1 362 465 - -
Lan9g0641 731 MobiDBLite consensus disorder prediction 180 208 - -
Lan9g0641 731 Pfam Protein tyrosine and serine/threonine kinase 394 659 IPR001245 GO:0004672|GO:0006468
Lan9g0641 731 Gene3D Transferase(Phosphotransferase) domain 1 466 668 - -
Lan9g0641 731 CDD STKc_IRAK 396 662 - -
Lan9g0641 731 Coils Coil 261 281 - -
Lan9g0641 731 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0641 Lan-Chr9 9436100 9441631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0641 370 679 Trihelix Transcription Factor Family AT1G70460 51.250 2.43e-101 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lan9g0641 PK_Tyr_Ser-Thr 5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0641 - - gmx:100816340 1276.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0641 9 9436100 9441631 Lan9g0641 9 9436100 9441631 ECH
Lan5g0615 5 12557335 12562711 Lan9g0641 9 9436100 9441631 LSH
Lan6g2131 6 31801181 31807121 Lan9g0641 9 9436100 9441631 PCT
Lan9g0641 9 9436100 9441631 Lan6g2131 6 31801181 31807121 PCT