Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0639 ATGGCTATGGAAGAAAAGCCTAAGCTCCTCCATGGAACAATTGAAGCTACCATTTTCAATGCCTCACCTTACTCCTCTTTATTTCCATTTAATTGTATACGCACAAATGGAAAACCTGCTTATGTGATCATCAAGATAAACAACAAGAAGGTTGCGAAAACGACCGAAGACGAAGATCGAATATGGAACCAAACATTCCAGATTCAATGTGCTCATGCAGCTGATTCAACAATCACCATTGTACTAAAAACATCACTCTCCACACTAGGGAAGTTCCATATCCAAGCCATGCAACTATTAGAGGAAAGAAATATGATAAATGGGTTTTTTCCTCTCCTAATGGAAAATGGAAAACCAAACCCAAAACTCAAGTTAAGGTTTTCATTATGGTTCAAGCCAGCAAAACTAGAACCAAGTTGGGAAAAAGTACTAAGAAATGAAGAGTTTCAAGGGCTTAAGAATGTTACATTTCCACAAAGGTCTAATTGTGAGGTTAAACTTTATCATGATGCTCATCATTCTTCTGCATTTCAACCTCCATTTGATGTATGTGGAGCTCCAAGAAAGCTATGGGAGGATGTCTATAAAGCCATTGAGGGTGCAAAGTATATAGTTTACATTGCAGGGTGGTCCTTCAATCCCAACATGGTTCTGGTTAGAGACCCTCAAACAGAAATCCAACATGCAAGAGGAATAAGTTTGGGAGACCTATTGAAGAAAAAAGCAGATGAAGATGTTGCTGTTAGAGTTATGCTTTGGGATGATGAAACTTCTTTACCCTTTATTAAGAACAAAAGTGTAATGGACACAAATGATGAAGATTCTTTAACTTATTTCAACAACACAAAAGTAATATGCAGAAAGTGTTCAAGGTTACACCTTAAATTTCCTACACTCTTTTCTCACCATCAAAAGACTATAACTATGGACACAAAAGGACCTAACTTTGTTAATGTTAGAGAACTTATGAGTTTTGTTGGTGGCTTAGATTTGTGTGATGGAAGATATGACACAGAGAAACATTCATTGTTTCAAACACTCATTAGGGAATCTCATTGCTATGACTTCTATCAGCCAAACATTGCAGGATCCAGCCTCAACAAAGGAGGGCCAAGGTTGCCTTGGCATGATGCTCATGCTTGTGTTATCGGCGACGCCGCTTGGGATGTGTTAACAAATTTCGAGCAAAGATGGACAAAGCAATGTGATCCTTCACTTCTAGTCTCTGCTAGCACTTTAATAACCCTTATGCCGAAAATAGGTTCAAGCAATTCAATAGAGAGGGATTGGAATGTTCAAGTATTCAGGTCAATAGACCATTCCTCATGTAATAACTTGCTGAGCAAGTTAACTGTAGAGAGGAGCATACATGAAGCTTATGTTGATGCAATTAGGCGCGCCGAAAGGTTTATCTACATCGAAAACGAATATTTCATTGGAGGGTGTCATATGTGGGATAAAGATAGGAATTGTGGCTGCACAAATCTAATTCCAATAGAAGTTGCACTCAAAGTGGTGAATAAGATCAAAGCAAAAGAGAAGTTTGCAGTGTATATAGTAATACCAATGTGGCCACAAGGAGTTGTTGAAAGTGAACATGTTCAAGATATATTGCATTGGACAAGGGAAACAATGTCAATGATGTATAAGTTGATAGGAGAAGCAATACAAGAAAGTGGTGAAACAAGAAATCCAAGAGAGTACTTGAGTTTTTTCTGCTTAGGAAATAGGGAGCATAAGGGAAAAGGAGAGTATCTTCCACTAGAATCACCACTTCCTCAAACACAATACTGGAATGCACAAAAGTATAGAAGATTCCTTGTTTATGTCCACTCCAAACTCATGATAGTGGATGACCTATACATACTAATAGGATCAGCTAATGTGAACCAAAGATCCATGGATGGAAAAAGAGACACAGAAATTGCCATAGGATGCTACCAATCTCATAATGAAGTTGATAACAAAATGAGCCATAGTGATATTAATGAATATAGAATGTCATTATGGTATGAACACACAAGTAGTGCTGATGCATTATTCTTAGAGCCAGAAAATTTGGAATGTGTTCATAGAATGTGTTCAATTGGTGATAAAATGTGGGAAATTTATGCTAGTGAAGAAATTGTGGATATGAAAAATGTGCACCTTGTAACTTACCCTATAAGGGTTACACAAGAAGGGTATGTTAAGGACCTAAGTAATGGAATTTATTTTCCTGATACAAAGTCTCTAGTGAAAGGAAATAGGTCTATAATGTTGCCCCCTATGGTTACAACTTAG 2283 0.3736 MAMEEKPKLLHGTIEATIFNASPYSSLFPFNCIRTNGKPAYVIIKINNKKVAKTTEDEDRIWNQTFQIQCAHAADSTITIVLKTSLSTLGKFHIQAMQLLEERNMINGFFPLLMENGKPNPKLKLRFSLWFKPAKLEPSWEKVLRNEEFQGLKNVTFPQRSNCEVKLYHDAHHSSAFQPPFDVCGAPRKLWEDVYKAIEGAKYIVYIAGWSFNPNMVLVRDPQTEIQHARGISLGDLLKKKADEDVAVRVMLWDDETSLPFIKNKSVMDTNDEDSLTYFNNTKVICRKCSRLHLKFPTLFSHHQKTITMDTKGPNFVNVRELMSFVGGLDLCDGRYDTEKHSLFQTLIRESHCYDFYQPNIAGSSLNKGGPRLPWHDAHACVIGDAAWDVLTNFEQRWTKQCDPSLLVSASTLITLMPKIGSSNSIERDWNVQVFRSIDHSSCNNLLSKLTVERSIHEAYVDAIRRAERFIYIENEYFIGGCHMWDKDRNCGCTNLIPIEVALKVVNKIKAKEKFAVYIVIPMWPQGVVESEHVQDILHWTRETMSMMYKLIGEAIQESGETRNPREYLSFFCLGNREHKGKGEYLPLESPLPQTQYWNAQKYRRFLVYVHSKLMIVDDLYILIGSANVNQRSMDGKRDTEIAIGCYQSHNEVDNKMSHSDINEYRMSLWYEHTSSADALFLEPENLECVHRMCSIGDKMWEIYASEEIVDMKNVHLVTYPIRVTQEGYVKDLSNGIYFPDTKSLVKGNRSIMLPPMVTT* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0639 760 Gene3D Endonuclease Chain A 177 421 - -
Lan9g0639 760 Pfam Phospholipase D Active site motif 610 633 IPR001736 GO:0003824
Lan9g0639 760 Gene3D Endonuclease Chain A 422 673 - -
Lan9g0639 760 PIRSF PLD_plant 3 760 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lan9g0639 760 PANTHER PHOSPHOLIPASE D 5 760 IPR015679 -
Lan9g0639 760 SUPERFAMILY Phospholipase D/nuclease 422 689 - -
Lan9g0639 760 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 606 633 IPR001736 GO:0003824
Lan9g0639 760 SMART pld_4 298 335 IPR001736 GO:0003824
Lan9g0639 760 SMART pld_4 606 633 IPR001736 GO:0003824
Lan9g0639 760 Pfam C2 domain 40 112 IPR000008 -
Lan9g0639 760 PANTHER PHOSPHOLIPASE D ALPHA 5 760 - -
Lan9g0639 760 SUPERFAMILY Phospholipase D/nuclease 146 407 - -
Lan9g0639 760 Pfam Phospholipase D C terminal 679 749 IPR024632 -
Lan9g0639 760 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 298 335 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0639 Lan-Chr9 9422024 9426372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0639 32 760 Phospholipase D Gene Family (Wang group) AT1G55180 60.946 0.0 925
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0639 K01115 - gmx:100812642 1238.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0639 9 9422024 9426372 Lan9g0639 9 9422024 9426372 ECH
Lan3g0224 3 1442864 1446378 Lan9g0639 9 9422024 9426372 PCT
Lan9g0639 9 9422024 9426372 Lan3g0224 3 1442864 1446378 PCT