Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0635 ATGGGTTTGAAGCTTATTTTTCTGTTAATTTTGCTACATTTAGTTGACAGTACTCAACAGCTTCATGAAAATGCAGTAGCCCCTAATCTGCACCATTCCAAAGGCAGAAGCCATTTTAGTATTGCACTTTCACCATCAAAACCATCTTCTGAAGTTCCTACAAGTATTGCTTTTCCACCTTCCAAGTCAATTCCAAAAACTTCTTCAAAAGAATGGACACATAGTTCTGTGGACTCTCCAATATCACATCATAAGCATCACTATATCAGTAGAATGTTCAAACACTCAACTCCAGCACCAATGCAGCCTCCTACGTACACCAATCAAGGTCCTTCAGTCTTCCAATCACAATCACCTTTCTTTTCGCCAAAGAGCCGGGATTTCCATGCACCTGCACCATCACCAGCAGTTTTATCAGGCAATTTGGTTATTCCACCTCCACCTCCTAATAAGGATTGCTTATCAATGACTTGCTCAGAGCCCTTGACATATACACCTCCCGGATCTCCGTGTGGTTGTGTGTGGCCCCTTCAAGTTAAACTCTGTATTAACATTGCAATATACAAGTTTTTTCCTTTGGTTTCAAAGCTTGCTGAGGAAGTTGCAGCCAGTGTTTTGTTAAACCATAGCCAAGTTCGCATCGTTGGAGCCGATGTAGCTAAACAGCAACTAGAGAAAACCAATGTTCTTATTAACATGGTACCTAAAGGAGTAAAATTTGATCATACCACAGCATTTTTAATATCTAAGAAGTTCTGGCACAGGGAGATTCTCATAGATGATTCCCTCTTTGGTGCTTATGAAGTACTCTATGTTCAATATCCAGGTCTTCCACCAACTCCATCAAGTGTTTCTAGTATGGATGACGGGCCAAATCCGGGCCGAAACAACAACGGTGCTATGATGAAACCCTTGGGAGTAGATGTCTCAAGGAAGAAAAAAGAAGGGAGTAATGGAAGAATTGTTTTTGTAATTGTACTATCATCTATCACTGCTTTTGTTCTATTCATTGGACTTGTCTGGCTTTGTCTATTGAAATGCGGTTCCCGTGTTCTTAAATCGGAACAAGCTCCAGAAGTTTTAATCTCATCCTCTTCCAAAATATCAGGGTCTGCTATGTCTCTGAATCATGGCATCATGCCAAGGTCTGCATCACTGTCCTTCAATTCTGGAACAATGACATATACAGGGTCTGCAAAAACATTTACTCTGAATGATATAGAGAAAGCAACAAATAACTTTGACTCTTCAAGAATATTAGGAGAAGGTGGATTTGGACTTGTTTACAAAGGTATTCTAAATGATGGGAGGAATGTAGCAGTGAAGATTCTCAAAAGAGATGATCAGCGCGGCGGCCGCGAATTCTTAGCAGAAGTTGAGATGCTTAGCCGCCTGCACCATAGAAATTTAGTTAAATTGTTTGGTATATGCACTGAGAAAAAGACTCATTGCCTAGTCTATGAGCTTGTTCCTAATGGAAGTGTTGAGTCACACTTACATGGTGCTGATAAGGAAACTGATCCACTTGATTGGGATGCTAGGATGAAGATTGCAATTGGTGGAGCTAGAGGATTGGCTTATTTACATGAAGATTCAAATCCATGTGTCATACATAGAGACTTCAAGTCCAGCAACATCTTGTTAGAACATGATTTTACACCAAAAGTCTCAGATTTTGGATTGGCTAGAACAGCATTGGATGAGGGAAACAAACATATATCCACACATGTTATGGGAACATTTGGCTACTTAGCTCCTGAATATGCAATGACTGGCCATCTTCTTGTAAAAAGTGATGTCTACAGCTATGGAGTTGTACTCCTAGAGCTTCTAACCGGAAGAAAGCCAGTGGATTTGTCACAACCACCCGGTCAAGAAAATCTCGTTACTTGGGCTCGTCCACTTCTCGCAAGCAAAGAAGGTTTAGATATGATCATAGACCCATATGTAAAAGACAGCATATCTGATGATACTTTGGTTAAAGTTGCAGCAATTGCTTCCATGTGTGTGCAACCCGAAGTCTCTCAACGTCCGTTCATGGGCGAAGTTGTTCAAGCCTTGAAGCTTGTATGCAGTGAGTTTGATGAACCAAGCTATATAAGATCAGTTAGTTTTCAAGAAGAGGGTCTTATAAGTGATGCAGAAGGGATACATAGAGAGGATTTATTAGAGTACCATAAACCATCATCTGGATATCAATCAGGTGAAGAAAATGTATCGTTATCGGCGTCCGAGTTGCTTAGTACTTCAGGCCAGGAATTTGAGTCCTTTAGGAAGCATTCTGCCTCAGGATCTCTGGTAATTGGGAAGAAAAGACAGTTCTGGCAGAAGTTGAGAAGTTTGTCTAGAGGTAGCACCAGTGACTATGGATTTTCAACTAAACTTTGA 2388 0.4066 MGLKLIFLLILLHLVDSTQQLHENAVAPNLHHSKGRSHFSIALSPSKPSSEVPTSIAFPPSKSIPKTSSKEWTHSSVDSPISHHKHHYISRMFKHSTPAPMQPPTYTNQGPSVFQSQSPFFSPKSRDFHAPAPSPAVLSGNLVIPPPPPNKDCLSMTCSEPLTYTPPGSPCGCVWPLQVKLCINIAIYKFFPLVSKLAEEVAASVLLNHSQVRIVGADVAKQQLEKTNVLINMVPKGVKFDHTTAFLISKKFWHREILIDDSLFGAYEVLYVQYPGLPPTPSSVSSMDDGPNPGRNNNGAMMKPLGVDVSRKKKEGSNGRIVFVIVLSSITAFVLFIGLVWLCLLKCGSRVLKSEQAPEVLISSSSKISGSAMSLNHGIMPRSASLSFNSGTMTYTGSAKTFTLNDIEKATNNFDSSRILGEGGFGLVYKGILNDGRNVAVKILKRDDQRGGREFLAEVEMLSRLHHRNLVKLFGICTEKKTHCLVYELVPNGSVESHLHGADKETDPLDWDARMKIAIGGARGLAYLHEDSNPCVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVTWARPLLASKEGLDMIIDPYVKDSISDDTLVKVAAIASMCVQPEVSQRPFMGEVVQALKLVCSEFDEPSYIRSVSFQEEGLISDAEGIHREDLLEYHKPSSGYQSGEENVSLSASELLSTSGQEFESFRKHSASGSLVIGKKRQFWQKLRSLSRGSTSDYGFSTKL* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0635 795 CDD STKc_IRAK 420 688 - -
Lan9g0635 795 PANTHER OS01G0750732 PROTEIN 39 794 - -
Lan9g0635 795 Pfam Protein tyrosine and serine/threonine kinase 417 687 IPR001245 GO:0004672|GO:0006468
Lan9g0635 795 Gene3D Transferase(Phosphotransferase) domain 1 490 702 - -
Lan9g0635 795 MobiDBLite consensus disorder prediction 39 76 - -
Lan9g0635 795 PANTHER OS01G0750732 PROTEIN 39 794 - -
Lan9g0635 795 MobiDBLite consensus disorder prediction 39 79 - -
Lan9g0635 795 SUPERFAMILY Protein kinase-like (PK-like) 393 687 IPR011009 -
Lan9g0635 795 Gene3D Phosphorylase Kinase; domain 1 387 489 - -
Lan9g0635 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
Lan9g0635 795 ProSitePatterns Protein kinases ATP-binding region signature. 420 442 IPR017441 GO:0005524
Lan9g0635 795 ProSiteProfiles Protein kinase domain profile. 414 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0635 795 MobiDBLite consensus disorder prediction 282 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0635 Lan-Chr9 9361813 9368534 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0635 150 795 Receptor kinase-like Gene Family AT5G56890 58.574 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lan9g0635 PK_Tyr_Ser-Thr 9.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0635 - - gmx:100814040 1172.53