Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0631 ATGGCACGGGGGAGAATAAGGGCAAGGCTCCGGAGGAGCAATCTTTACACATTCGGTTGCCTTCGGCCTTCTACCTCCGAGGAGGAGCCTCATCCACTTCAAGGTCCTGGTTTTTCACGAACTGTCCATTGCAACCAGCCTCTGGTCCATGAAAGGAAACCTCTATTTTACTGCAAGAATGATATATCCACGACGAAATACAATGTTATTACATTTTTGCCCAAAGCGCTTTTTGAACAATTTCGAAGGGTTGCTAATATATACTTCCTTCTGGCTGCGTGCCTCTCAACCTCTTCGATGTCACCTTTCAGCCCGCTAAGCATGATTGCTCCTCTGGCTTTTGTCGTGGGGCTTAGTATGGCAAAGGAAGCATTGGAAGATTCACGAAGGTTTGTTCAAGATGTCAAAGTTAATCGCCGGAAAGTTAATCAGCATAAAGACAATGGTGTTTTTGGTCCAAGATCGTGGCAGAACATTATGGTTGGGGATGTGGTAAAAGTAGAAAAGGATCATTTTTTCCCAGCTGATCTGCTTCTCTTGTCATCAAGTTACGAGGACGGGATATGCTATGTGGAGACAATGAATTTAGATGGTGAGACCAACTTGAAGGTGAAAAGATCTTTGGAGACTACCTTGACTCTAGATAATGATGGAGCCTTTAAGGATTTCACTGGAACAATACGTTGCGAAGACCCAAACTCCAATCTTTACACCTTTGTTGGAAACTTAGAGTATGAACGCCAGGTTTATCCTCTTGATCCTAGTCAAATTCTCCTCAGAGATTCTAAGCTCCGTAACACTGACTACATCTATGGGGTGGTCATTTTCACTGGTCATGATAGCAAAGTCATGCAAAATTCCACAAGATCCCCTTCAAAAAGGAGCACGATCGAAAAGAAGATGGATTATATCATATACACTCTCTTCACTGTCCTTATTTTGATATCTGTTGTTAGTTCCATAGGATTTGTCATAAAGACTAAGTACCAATCCACAGCATGGTGGTACTTACGGCCGGACAATATTGATACTCAGTATAATCCCCAGAAAATTGGAGTGGCTGGGATTAGTCATCTGGTTACTGCACTCATTCTTTATGGATATTTGATACCCATCTCACTTTATGTTTCGATTGAGGTTGTGAAGGTTTTACAGGCAACCTTCATCAACCAAGATATTCAAATGTATGACGAAGATACTGGGACTCCAGCAGATGCACGGACGTCAAATTTGAATGAAGAGTTGGGACAGGTGGACACTGTCCTCTCCGATAAAACTGGAACTTTAACCTGCAATCAGATGGACTTCTTGAAGTGTTCCATTGCTGGCACTGCATATGGTGTGCGTTCAAGTGACGTTGAACTTGCTGCAGCAAAGCAGATGGCTTCTGATCTCGAGGACGAAGATTCAGATCTCTCAAATTTCCCCATGCCCAAGACTAAAGTTTCATGGGAAGATGTTAGAAGAGCTGAACAAATTGAACTGGAGTCTGTTGTTACTTCCAATAGTGATGAGGATCATAGACAGACCATAAAGGGATTTGGTTTTGAAGACAACCGTCTTATGAATGTTAACTGGTTGAAAGAGCCCAAGGCTGATGTTCTTTTGATGTTTTTTCGTATATTAGCAGTTTGCCATACCGCCATTCCTGAGCTGAATGAGGACACTGGCAGTTTTACATATGAAGCCGAGTCACCTGATGAAGGGGCTTTTCTTGTAGCGGCAAGAGAGTTTGGTTTTGAGCTATTTAAAAGGACTCAGTCAAGTGTTTTCATACGTGAAAGACTATCTGCTTCAGGAGAAGTGGTTGAAAGAGAATACAAACTCTTGAATCTGCTAGATTTCACTAGTAAAAGAAAGCGCATGTCAGTGATAGTACGTGATGAGGAGGGAAGCATTTTTCTTCTGTGCAAAGGGGCTGACAGTATCATATTTGATCGTTTGTCAAAGAATGGAAAAATGTATCTGGAGGCTACTACTAAACATTTAAATGAATATGGAGAAGCTGGTTTGCGAACCCTAGCCCTGGCTTATAGAAAGCTTGATGAGGAAGAGTTCTCTGCTTGGAACAATGAGTTTCAGAAAGCCAAATCAGCTGTTGGAGTGGACAGAGAGTTAACACTTGAGCGGATATCAGAGCTTATGGAAAAAGAGTTGATTCTTGTCGGGGCTACCGCAGTGGAAGACAAACTGCAGAAAGGGGTGCCCCAATGCATTGATAAACTTGCTCAAGCGGGTCTCAAGATCTGGGTGTTGACAGGGGATAAGATGGAAACTGCAATAAACATTGGATTTGCTTGTAGTTTGCTTCGACAAGGCATGAAGCAGATCTGTATAACTACTCCGAGTTCAGAAAGTGATGGCAAAGAGATCATCAAGGACAACATTATAAATCAAATCATCAATGCCTCACAAATGATAAAGCTGAACAAAGACCCTCATGCTGCATTTGCATTAATTATTGATGGGAAAACTCTGACATATGCTTTAGAGGATGATGTGAAGCACCAGTTTTTGGAATTGGCTGTTGATTGTGCATCTGTCATCTGCTGCCGTGTGTCTCCCAAGCAAAAGGCATTGGTGACAAGGTTAGTGAAAGAAGGAACTGGGAAGACCACTCTAGCAATAGGTGATGGTGCAAATGATGTTGGGATGATTCAAGAAGCAGATATTGGTGTTGGAATCAGTGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGTGACTTTGCTATTGCCCAATTTCGATTTTTAGAGCGGCTTCTGGTAGTCCATGGACACTGGTGTTATAAGAGAATAGCCCAAATGATATGTTATTTCTTCTACAAGAATATAGCATTTGGCCTCACCATCTTCTACTTTGAGGCCTTTACATCCTTCTCCGGTCAATCAGTTTACGATGACTGGTACATGATATTGTTCAATGTTGTTCTGACATCATTACCTGTCATTTCACTTGGTGTTTTTGAACAAGATGTTCCATCAGAAGTTTGCTTACAGTTTCCTGCACTGTATCAACAAGGGCCGAAAAATCTGTTCTTCGACTGGTACAGAATATTGGGATGGATGGGAAATGGTCTCTATTCCTCCCTAGTCATTTTCTTCCTTAACATCGCCATCTTCAACGACAAAGCATTCCGTTCTAACGGCCAGACTGCTGATATGGCTGCTGTCGGGACCACAATGTTCACTTGCATCATCTGGGCCGTCAACTGCCAGATCGCGCTGATAATGAGCCATTTTACATGGATTCAGCACCTGTTTGTATGGGGAAGCATAACAACCTGGTACCTTTTTCTCTTGTTATACGGCACGCTTTCTCCTGAGTATTCCGGAACTGCTTACCAAATACTAGTTGAAGCTCTGGGTCCTGCACCTATATATTGGATAGCAACACTTTTAGTTACAGTTATATGCAATCTTCCTTATCTTGCTCACATATCCTACCAAAGATGTTTCAATCCCATGGATCATCACATTATCCAAGAAATCAAGTACTACCGAAAGGATATTGAAGATCATCACATGTGGACAAGGGAGAGGTCTAAAGCAAGACAAGAAACTCAGATTGGATTCACAGCAAGAGTGGAAGCAAAGATCAGACAATTGAAAGGAAAACTGCAGAAGAAGCACTCTTCTTTGGGTATTTTGTCATCGTGA 3657 0.4222 MARGRIRARLRRSNLYTFGCLRPSTSEEEPHPLQGPGFSRTVHCNQPLVHERKPLFYCKNDISTTKYNVITFLPKALFEQFRRVANIYFLLAACLSTSSMSPFSPLSMIAPLAFVVGLSMAKEALEDSRRFVQDVKVNRRKVNQHKDNGVFGPRSWQNIMVGDVVKVEKDHFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLETTLTLDNDGAFKDFTGTIRCEDPNSNLYTFVGNLEYERQVYPLDPSQILLRDSKLRNTDYIYGVVIFTGHDSKVMQNSTRSPSKRSTIEKKMDYIIYTLFTVLILISVVSSIGFVIKTKYQSTAWWYLRPDNIDTQYNPQKIGVAGISHLVTALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDEDTGTPADARTSNLNEELGQVDTVLSDKTGTLTCNQMDFLKCSIAGTAYGVRSSDVELAAAKQMASDLEDEDSDLSNFPMPKTKVSWEDVRRAEQIELESVVTSNSDEDHRQTIKGFGFEDNRLMNVNWLKEPKADVLLMFFRILAVCHTAIPELNEDTGSFTYEAESPDEGAFLVAAREFGFELFKRTQSSVFIRERLSASGEVVEREYKLLNLLDFTSKRKRMSVIVRDEEGSIFLLCKGADSIIFDRLSKNGKMYLEATTKHLNEYGEAGLRTLALAYRKLDEEEFSAWNNEFQKAKSAVGVDRELTLERISELMEKELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITTPSSESDGKEIIKDNIINQIINASQMIKLNKDPHAAFALIIDGKTLTYALEDDVKHQFLELAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFTSFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYSSLVIFFLNIAIFNDKAFRSNGQTADMAAVGTTMFTCIIWAVNCQIALIMSHFTWIQHLFVWGSITTWYLFLLLYGTLSPEYSGTAYQILVEALGPAPIYWIATLLVTVICNLPYLAHISYQRCFNPMDHHIIQEIKYYRKDIEDHHMWTRERSKARQETQIGFTARVEAKIRQLKGKLQKKHSSLGILSS* 1219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0631 1218 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1216 - -
Lan9g0631 1218 Gene3D - 113 288 - -
Lan9g0631 1218 Gene3D - 718 916 IPR023214 -
Lan9g0631 1218 CDD P-type_ATPase_APLT_Dnf-like 60 1035 - -
Lan9g0631 1218 SUPERFAMILY Calcium ATPase, transduction domain A 147 286 IPR008250 -
Lan9g0631 1218 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Lan9g0631 1218 Pfam Phospholipid-translocating P-type ATPase C-terminal 904 1154 IPR032630 -
Lan9g0631 1218 SFLD p-type atpase 405 927 IPR044492 -
Lan9g0631 1218 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1162 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lan9g0631 1218 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Lan9g0631 1218 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 521 684 IPR023299 GO:0000166
Lan9g0631 1218 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Lan9g0631 1218 PRINTS P-type cation-transporting ATPase superfamily signature 876 895 - -
Lan9g0631 1218 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1143 IPR023298 -
Lan9g0631 1218 SUPERFAMILY HAD-like 410 920 IPR036412 -
Lan9g0631 1218 Gene3D - 584 701 IPR023299 GO:0000166
Lan9g0631 1218 Coils Coil 448 468 - -
Lan9g0631 1218 Pfam Cation transport ATPase (P-type) 544 649 - -
Lan9g0631 1218 SFLD C1.7: P-type atpase like 405 927 - -
Lan9g0631 1218 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 848 958 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan9g0631 1218 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0631 Lan-Chr9 9274646 9282241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0631 1 1218 Primary Pumps ATPases AT1G17500 75.102 0.0 1925
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0631 K01530 - gmx:100819559 2160.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0631 9 9274646 9282241 Lan9g0631 9 9274646 9282241 ECH
Lan6g2148 6 31938257 31945258 Lan9g0631 9 9274646 9282241 PCT
Lan10g0296 10 1948185 1955724 Lan9g0631 9 9274646 9282241 PCT
Lan3g0234 3 1531093 1537292 Lan9g0631 9 9274646 9282241 PCT
Lan9g0631 9 9274646 9282241 Lan6g2148 6 31938257 31945258 PCT
Lan9g0631 9 9274646 9282241 Lan10g0296 10 1948185 1955724 PCT
Lan9g0631 9 9274646 9282241 Lan3g0234 3 1531093 1537292 PCT